Method of high spatial resolution determining a position of a singularized molecule which is excitable for emission of luminescence light

Patent metadata

Field	Value
Publication number	US-10908089-B2
Application number	US-201916377631-A
Country	US
Kind code	B2
Filing date	Apr 8, 2019
Priority date	Oct 10, 2016
Publication date	Feb 2, 2021
Grant date	Feb 2, 2021

Abstract

For spatial high resolution determining a position of a singularized molecule, which is excitable with excitation light for emission of luminescence light, in a sample, the excitation light is provided with an intensity distribution comprising an intensity increasing region with a known strictly monotonic course of an intensity of the luminescence light over a distance of the singularized molecule to a model point of the intensity distribution. The model point is arranged at different preliminary positions such that the intensity increasing region extends over a preliminary local area of the sample including the singularized molecule. From intensity values including intensities of the luminescence light separately registered for the preliminary positions of the model point, a further local area is determined which includes the singularized molecule and which is smaller than the preliminary local area. These steps are repeated using the last further local area as the next preliminary local area.

First claim

We claim:

1. A method of spatial high resolution determining, in n spatial dimensions, a position of a singularized molecule in a sample, the singularized molecule being excitable with excitation light for emission of luminescence light, and n being 1, 2 or 3, the method comprising
providing the excitation light with an intensity distribution which, in each of the n spatial dimensions, comprises at least one intensity increasing region with a known strictly monotonic course of an intensity of the luminescence light from the singularized molecule over a distance of the singularized molecule to a model point of the intensity distribution,
determining a preliminary local area in the sample which includes the singularized molecule,
directing the excitation light with the intensity distribution onto the sample, and
arranging the model point of the intensity distribution, in each of the n spatial directions, at different positions in the sample,
separately registering the luminescence light emitted by the singularized molecule for each of the different positions of the model point of the intensity distribution in the sample, and
deducing the position of the singularized molecule in the sample from the intensities of the separately registered luminescence light,
wherein (i) in each of the n spatial dimensions, at least one preliminary position of the model point of the intensity distribution is defined such that the at least one intensity increasing region associated with the respective one of the n spatial dimensions extends over the preliminary local area in the respective one of the n spatial dimensions,
wherein (ii) from intensity values of the luminescence light which include two intensity values for each of the n spatial dimensions, at least one of which being the intensity of the luminescence light registered for the at least one position of the model point of the intensity distribution in the respective one of the n spatial dimensions, a further local area in the sample is determined which includes the singularized molecule and which is smaller than the preliminary local area, and
wherein the steps (i) and (ii) are repeated at least once using the last further local area as the next preliminary local area.

2. The method of claim 1 , wherein the intensity of the excitation light in the at least one intensity increasing region increases starting from zero at the model point.

3. The method of claim 1 , wherein the model point is a zero point of the intensity distribution which, in each of the n spatial dimensions, is delimited on one side by the at least one intensity increasing region and on the other side by a further intensity increasing region.

4. The method of claim 3 , wherein the at least one intensity increasing region and the further intensity increasing region are symmetric with regard to the zero point.

5. The method of claim 1 , wherein the second intensity value for the respective one of the n spatial dimension is the intensity of the luminescence light registered for a second position of the model point of the intensity distribution which, in the respective one of the n spatial dimensions, is arranged
at another point on the same side of the preliminary local area as the at least one position of the model point of the intensity distribution or
at a point on an opposite side of the preliminary local area opposing the at least one position of the model point of the intensity distribution.

6. The method of claim 1 , wherein the number of the different positions of the model point of the intensity distribution in the sample, which is defined in each execution of the step (i), is between n+1 and 2n.

7. The method of claim 1 , wherein the second intensity value for the respective one of the n spatial dimension is a saturation value of the intensity of the luminescence light from the singularized molecule when excited with the excitation light.

8. The method of claim 1 , wherein the luminescence light is quasi-simultaneously registered for the different positions of the model point of the intensity distribution in the sample in that the model point is repeatedly shifted between the different positions.

9. The method of claim 1 , wherein the luminescence light is registered for the different positions of the model point of the intensity distribution in the sample only until the intensities of the registered luminescence light for the different positions are measured at a sufficient accuracy so that the further local area can be determined by a predetermined value smaller than the preliminary local area.

10. The method of claim 9 , wherein the predetermined value by which the further local area in the respective spatial dimension can be determined smaller than the preliminary local area is in a range from 5% to 75%.

11. The method of claim 1 , wherein a maximum intensity of the excitation light is adjusted such that the preliminary local area with regard to each of the different positions of the model point of the intensity distribution in the sample is in a region of not more than 90% of a saturation intensity of the excitation light.

12. The method of claim 11 , wherein the maximum intensity of the excitation light is increased in at least one of the repetitions of the steps (i) and (ii).

13. The method of claim 12 , wherein the maximum intensity of the excitation light is increased by at least 50% over all repetitions of the steps (i) and (ii).

14. The method of claim 1 , wherein the steps (i) and (ii) are repeated until the further local area is no longer larger than a predetermined precision at which the position of the singularized molecule in the sample is to be determined.

15. The method of claim 14 , wherein the predetermined precision is in a range between 0.5 and 20 nm.

16. The method of claim 1 , wherein, at a beginning of determining the position of the singularized molecule, a larger area of the sample including the singularized molecule is scanned with at least one intensity increasing region or with a Gaussian intensity distribution of the excitation light in each of the n spatial dimensions, wherein the preliminary local area is determined from a course of an intensity of the luminescence light registered during scanning.

17. The method of claim 1 , wherein, at a beginning of determining the position of the singularized molecule, the excitation light is directed with a Gaussian intensity distribution point by point or on a circular or spiral track onto a larger area of the sample including the singularized molecule, wherein the preliminary local area is determined from a course of an intensity of the luminescence light registered over the points or the spiral track, respectively.

18. The method of claim 1 , wherein, at a beginning of determining the position of the singularized molecule, a larger area of the sample including the singularized molecule is as a whole subjected to the excitation light and imaged on a spatially resolving detector, wherein the preliminary local area is determined from a spatial distribution of the luminescence light registered with the detector.

19. The method of claim 1 , wherein the luminescence light is registered at a spatial resolution, and wherein the position of the singularized molecule is additionally determined from a spatial distribution of all luminescence light which has been emitted by the singularized molecule and registered.

20. The method of claim 1 , wherein the sample, prior to determining the position of the singularized molecule, is subjected to a swit

Assignees

• Max Planck Gesellschaft

Inventors

• Balzarotti Francisco
• Eilers Yvan
• Gwosch Klaus
• Hell Stefan W

Classifications

• G02B21/0076

  arrangements using fluorescence or luminescence · CPC title

• G01N21/6458 Primary

  Fluorescence microscopy (fluorescence microscopes per se G02B21/0076 and G02B21/16) · CPC title

• G01N21/6428

  Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes" (in vivo A61B5/00; immunoassay G01N33/53) · CPC title

• G02B21/365

  Control or image processing arrangements for digital or video microscopes (G02B21/361, G02B21/362 take precedence) · CPC title