Biomarker Hsp90 for predicting effect of a c-Met inhibitor

Patent metadata

Field	Value
Publication number	US-9956244-B2
Application number	US-201514814278-A
Country	US
Kind code	B2
Filing date	Jul 30, 2015
Priority date	Jul 30, 2014
Publication date	May 1, 2018
Grant date	May 1, 2018

Abstract

A biomarker Hsp90 for predicting an efficacy of a c-Met inhibitor, selecting a subject for application of a c-Met inhibitor, or monitoring an efficacy of a c-Met inhibitor, and a relevant method of using Hsp90.

First claim

What is claimed is:

1. A method of selecting a subject for application of a c-Met inhibitor, the method comprising:
measuring Hsp90 alpha protein level and/or Hsp90 alpha gene expression level,
detecting a mutation of Hsp90 alpha and/or an Hsp90 alpha coding gene;
or a combination thereof,
in a biological sample from a patient with lung cancer,
and
selecting the patient for application of the c-Met inhibitor, when
the Hsp90 alpha protein level or the Hsp90 alpha gene expression level in the biological sample from the patient is lower than that of a reference sample in which the c-Met inhibitor has no effect, and/or the mutation of Hsp90 alpha or the Hsp90 alpha coding gene is identified in the biological sample,
wherein the mutation of Hsp90 alpha is C598A, I128T, or a combination thereof, of human Hsp90 alpha, and the Hsp90 alpha coding gene is a gene encoding a human Hsp90 alpha comprising the mutation of C598A, I128T, or a combination thereof,
the method further comprising administering the c-Met inhibitor to the patient if
(a) the Hsp90 alpha protein level or the Hsp90 alpha gene expression level in the biological sample from the patient is lower than that of a reference sample in which the c-Met inhibitor has no effect, and/or
(b) the mutation of Hsp90 alpha or the Hsp90 alpha coding gene is identified in the biological sample.

2. The method of claim 1 , further comprising:
measuring c-Met protein level and/or c-Met gene expression level.

3. The method of claim 1 , wherein the c-Met inhibitor is at least one selected from the group consisting of an anti-c-Met antibody or an antigen-binding fragment thereof, crizotinib, cabozantinib, foretinib, PHA-665752, SU11274, SGX-523, PF-04217903, EMD 1214063, golvatinib, INCB28060, MK-2461, tivantinib, NVP-BVU972, AMG458, BMS 794833, BMS 777607, MGCD-265, AMG-208, JNJ-38877605, and pharmaceutically acceptable salts thereof.

4. The method of claim 3 , wherein the anti-c-Met antibody or an antigen-binding fragment thereof recognizes or binds to a polypeptide comprising 5 to 19 contiguous amino acid residues within the amino acid sequence of SEQ ID NO: 71 and wherein the polypeptide comprises at least the amino sequence of SEQ ID NO: 73.

5. The method of claim 1 , wherein
the c-Met inhibitor is an anti-c-Met/anti-EGFR bispecific antibody comprising an anti-c-Met antibody or an antigen-binding fragment thereof and an anti-EGFR antibody or an antigen-binding fragment thereof, wherein
the anti-c-Met antibody or an antigen-binding fragment thereof recognizes or binds to a polypeptide comprising 5 to 19 contiguous amino acid residues within the amino acid sequence of SEQ ID NO: 71 and wherein the polypeptide comprises at least the amino sequence of SEQ ID NO: 73;
and
the anti-EGFR antibody or an antigen-binding fragment thereof comprises:
a CDR-H1 comprising the amino acid sequence of SEQ ID NO: 109, a CDR-H2 comprising the amino acid sequence of SEQ ID NO: 110, a CDR-H3 comprising the amino acid sequence of SEQ ID NO: 111,
a CDR-L1 comprising the amino acid sequence of SEQ ID NO: 112, a CDR-L2 comprising the amino acid sequence of SEQ ID NO: 113, and a CDR-L3 comprising the amino acid sequence of SEQ ID NO: 114.

6. The method of claim 4 , wherein the anti-c-Met antibody or an antigen-binding fragment thereof comprises:
(1) a CDR-H1 of SEQ ID NO: 1, a CDR-H2 of SEQ ID NO: 2, a CDR-H3 of SEQ ID NO: 3, a CDR-L1 of SEQ ID NO: 10, a CDR-L2 of SEQ ID NO: 11, and a CDR-L3 of SEQ ID NO: 13,
(2) a CDR-H1 of SEQ ID NO: 1, a CDR-H2 of SEQ ID NO: 2, a CDR-H3 of SEQ ID NO: 3, a CDR-L1 of SEQ ID NO: 106, a CDR-L2 of SEQ ID NO: 11, and a CDR-L3 of SEQ ID NO: 13,
(3) a CDR-H1 of SEQ ID NO: 1, a CDR-H2 of SEQ ID NO: 2, a CDR-H3 of SEQ ID NO: 3, a CDR-L1 of SEQ ID NO: 10, a CDR-L2 of SEQ ID NO: 11, and a CDR-L3 of SEQ ID NO: 12,
(4) a CDR-H1 of SEQ ID NO: 1, a CDR-H2 of SEQ ID NO: 2, a CDR-H3 of SEQ ID NO: 3, a CDR-L1 of SEQ ID NO: 10, a CDR-L2 of SEQ ID NO: 11, and a CDR-L3 of SEQ ID NO: 14,
(5) a CDR-H1 of SEQ ID NO: 1, a CDR-H2 of SEQ ID NO: 2, a CDR-H3 of SEQ ID NO: 3, a CDR-L1 of SEQ ID NO: 10, a CDR-L2 of SEQ ID NO: 11, and a CDR-L3 of SEQ ID NO: 15, or
(6) a CDR-H1 of SEQ ID NO: 1, a CDR-H2 of SEQ ID NO: 2, a CDR-H3 of SEQ ID NO: 3, a CDR-L1 of SEQ ID NO: 10, a CDR-L2 of SEQ ID NO: 11, and a CDR-L3 of SEQ ID NO: 16.

Assignees

• Samsung Electronics Co Ltd

Inventors

• Lee Ji Min
• Kim Bo Gyou
• Oh Seung Ja
• Kim Kyung Ah
• Lee Saet Byoul
• Hwang Jae Woong

Classifications

• A61K45/06

  Mixtures of active ingredients without chemical characterisation, e.g. antiphlogistics and cardiaca · CPC title

• A61K39/39533

  against materials from animals · CPC title

• G01N2800/52

  Predicting or monitoring the response to treatment, e.g. for selection of therapy based on assay results in personalised medicine; Prognosis · CPC title

• C07K2317/76

  Antagonist effect on antigen, e.g. neutralization or inhibition of binding · CPC title

• C07K2317/92

  Affinity (KD), association rate (Ka), dissociation rate (Kd) or EC50 value · CPC title