Methods related to real-time cancer diagnostics at endoscopy utilizing fiber-optic Raman spectroscopy

Patent metadata

Field	Value
Publication number	US-9931039-B2
Application number	US-201314412053-A
Country	US
Kind code	B2
Filing date	Jul 2, 2013
Priority date	Jul 2, 2012
Publication date	Apr 3, 2018
Grant date	Apr 3, 2018

Abstract

A method of achieving instrument independent measurements for quantitative analysis of fiber-optic Raman spectroscope system, the system comprising a laser source, a spectroscope and a fiber optic probe to transmit light from the laser source to a target and return scattered light to the spectroscope, the method comprising transmitting light from the laser source to a standard target having a known spectrum, recording a calibration spectrum of the scattered light from the standard target, comparing the known spectrum and the calibration system and generating a probe and/or probe-system transfer function, and storing the transfer function. Further provided is a method of performing real-time diagnostic Raman spectroscopy optionally in combination with the other disclosed methods.

First claim

The invention claimed is:

1. A method of calibrating a fiber optic Raman spectroscope system, the system comprising a processor configured to execute program instructions, a storage device, a laser source, a primary spectrometer system and a plurality of fiber optic probes, including at least a first optic probe and a second optic probe, each of the plurality of fiber optic probes couplable to the primary spectrometer system and each of the plurality of fiber optic probes configured to transmit light from the laser source to a target and return scattered light to the primary spectrometer system the method comprising:
storing a known spectrum for a standard target in the storage device;
transmitting light from the laser source to the standard target having the known spectrum; and
for each of the plurality of fiber optic probes:
recording a calibration spectrum of the scattered light returned to the primary spectrometer system through each of the plurality of fiber optic probes from the standard target;
comparing the known spectrum and the calibration spectrum and generating with the use of the processor at least a first transfer function for the first optic probe and a second transfer function for the second optic probe;
calculating a calibration function based on at least the first transfer function and second transfer function;

storing the first transfer function, the second transfer function and the calibration function in the storage device to thereby associate at least the first fiber optic probe with the first transfer function and the secondary fiber optic probe with the second transfer function.

2. The method according to claim 1 further comprising:
subsequently illuminating a test subject using a selected fiber optic probe within the plurality of fiber optic probes;
recording a spectrum while illuminating the test subject; and
correcting the spectrum in accordance with the stored transfer function associated with the selected fiber optic probe.

3. The method according to claim 1 wherein the spectrometer has an associated spectrometer transfer function and the probe has an associated probe transfer function, and the transfer function is a function of the spectrometer transfer function and the probe transfer function.

4. The method according to claim 1 comprising associating the calibration function with the secondary fiber optic probe.

5. The method according to claim 1 comprising, on a secondary spectrometer system, using the primary fiber optic probe and generating a secondary system transfer function and storing the secondary system transfer function.

6. The method according to claim 5 comprising using the secondary fiber optic probe with the secondary spectrometer system and modifying the stored secondary system transfer function in accordance with the calibration function.

7. The method according to any one of claims 1 comprising an initial step of performing a wavelength-axis calibration of the secondary spectrometer system in accordance with the primary spectrometer system.

8. The method according to claim 1 , further comprising:
transmitting light from the laser source to a plurality of targets;
for each target, measuring the transmitted power of the light from the laser source and the captured spectrum of the scattered light at the spectroscope;
performing a multivariate analysis of the captured spectra with the measured transmitted power as a dependent variable; and
storing a resulting model of laser power as a function of spectral characteristics of the captured spectra.

9. The method according to claim 8 , further comprising:
transmitting laser light to a test target;
supplying a captured spectrum to the model; and
calculating an estimate of the transmitted power.

10. A method of operating a fiber optic Raman spectroscope system within a plurality of fiber optic Raman spectroscope systems, the plurality of fiber optic Raman spectroscope systems including each of a master Raman spectroscope system having a master spectrometer and a laser source, and at least one secondary Raman spectroscope system, each secondary Raman spectroscope system having a corresponding secondary spectroscope distinct from the master spectroscope and a laser source, the master Raman spectroscope system couplable to a primary fiber optic probe and/or a plurality of secondary fiber optic probes, each secondary Raman spectroscope system couplable to the primary fiber optic probe and/or the plurality of secondary fiber optic probes, the method comprising:
(A) storing a known spectrum for a standard source and providing the standard source having the known spectrum; and
(B) for each secondary Raman spectroscope system, performing a wavelength calibration of the secondary spectrometer thereof to the master spectrometer of the master Raman spectroscope system; and
(C) performing a first calibration process for each secondary Raman spectroscope system, the first calibration process comprising:
(i) determining a plurality of transfer functions, each of the plurality of transfer functions corresponding to a selected secondary fiber optic probe coupled to the secondary Raman spectroscope system, each of the plurality of transfer functions establishing a mathematical relationship between the known spectrum and a measured calibration spectrum obtained while the selected secondary fiber optic probe is coupled to the secondary Raman spectroscope system; and
(ii) associating each selected secondary fiber optic probe with the transfer function determined therefor;

or
(D) performing a second calibration process comprising:
(i) for each secondary Raman spectroscope system:
(a) determining a system transfer function corresponding to the secondary Raman spectroscope system while the primary fiber optic probe is coupled thereto during measurement thereby of a calibration spectrum of scattered light received from the standard source; and
(b) associating the secondary Raman spectroscopy system with the system transfer function determined therefor; and

(ii) for each secondary fiber optic probe:
(a) determining a calibration function for the secondary fiber optic probe, the calibration function corresponding to the secondary fiber optic probe coupled to the master Raman spectroscope system during measurement of a spectrum of scattered light received from the standard source; and
(b) associating the secondary fiber optic probe with the calibration function determined therefor.

11. The method according to claim 10 wherein the plurality of secondary fiber optic probes comprises a plurality of reserve probes for a selected secondary Raman spectroscope system, and wherein the first calibration process is performed for the selected secondary Raman spectroscope system to determine a transfer function corresponding to each of the reserve probes.

12. The method according to claim 10 comprising performing the second calibration process to match any plurality of secondary fiber optic probes to any number of secondary Raman spectroscope systems such that spectra captured using different secondary Raman spectroscope systems and different secondary fiber optic probes are consistent and comparable.

13. A Raman spectroscope system comprising:
a laser source;
a primary spectrometer system;
a plurality of fiber optic probes, including at least a first fiber optic probe and a secondary fiber optic probe, each of the plurality of fiber optic probes couplable to the primary spectrometer system and, when coupled to the primary system, configured to transmit light from the laser source to a target and return scattered light to the primary spectrometer system;
a

Assignees

• Nat Univ Singapore

Inventors

• Huang Zhiwei
• Ho Khek Yu
• Bergholt Mads Sylvest
• Zheng Wei
• Yeoh Khay Guan
• Duraipandian Shiyamala

Classifications

• A61B5/0075 Primary

  by spectroscopy, i.e. measuring spectra, e.g. Raman spectroscopy, infrared absorption spectroscopy (A61B5/0071 takes precedence) · CPC title

• G01N2201/12753

  and storage · CPC title

• G01N21/274

  Calibration, base line adjustment, drift correction · CPC title

• A61B5/0084

  for introduction into the body, e.g. by catheters (A61B5/1459 takes precedence) · CPC title

• G01N21/65 Primary

  Raman scattering · CPC title