Targeted mass analysis

Patent metadata

Field	Value
Publication number	US-9812307-B2
Application number	US-201415021108-A
Country	US
Kind code	B2
Filing date	Sep 10, 2014
Priority date	Sep 11, 2013
Publication date	Nov 7, 2017
Grant date	Nov 7, 2017

Abstract

A mass spectrometer comprises: an ion source that generates ions having an initial range of mass-to-charge ratios; an auxiliary ion detector, downstream from the ion source that receives a plurality of first ion samples derived from the ions generated by the ion source and determines a respective ion current measurement for each of the plurality of first ion samples; a mass analyzer, downstream from the ion source that receives a second ion sample derived from the ions generated by the ion source and to generate mass spectral data by mass analysis of the second ion sample; and an output stage that establishes an abundance measurement associated with at least some of the ions generated by the ion source based on the ion current measurements determined by the auxiliary ion detector.

First claim

The invention claimed is:

1. A mass spectrometer, comprising:
an ion source, arranged to generate ions having an initial range of mass-to-charge ratios;
an auxiliary ion detector, located downstream from the ion source and arranged to receive a plurality of first ion samples having a reduced range of mass-to-charge ratios that is narrower than the initial range derived from the ions generated by the ion source and to determine a respective ion current measurement for each of the plurality of first ion samples;
a mass analyser, located downstream from the ion source and arranged to receive a second ion sample derived from the ions generated by the ion source and to generate mass spectral data by mass analysis of the second ion sample, wherein a resolution of the mass spectral data is high enough to mass resolve the ion current measurement determined by the auxiliary ion detector within the reduced range of mass-to-charge ratios; and
a processor configured to establish an abundance measurement associated with at least some of the ions generated by the ion source based on a combination of the mass spectral data generated by the mass analyser and the ion current measurements determined by the auxiliary ion detector, wherein the mass spectral data is used to mass resolve the ion current measurements within the reduced range of mass-to-charge ratios.

2. The mass spectrometer of claim 1 , wherein the auxiliary ion detector is configured to provide the plurality of ion current measurements over a time period, wherein the mass analyser is arranged to generate a single set of mass spectral data over the time period.

3. The mass spectrometer of claim 1 , wherein the auxiliary ion detector is configured to have an average frequency of ion current measurement which is higher than the average frequency of mass analysis of the mass analyser.

4. The mass spectrometer of claim 3 , wherein the auxiliary ion detector is configured to determine the plurality of ion current measurements with a time interval therebetween and wherein the mass analyser is configured to perform mass analysis of the second ion sample over a time duration that is longer than the time interval between the plurality of ion current measurements.

5. The mass spectrometer of claim 1 , further comprising:
a mass filter, arranged upstream from the auxiliary ion detector and configured to receive ions generated by the ion source and to transmit ions having a reduced range of mass-to-charge ratios, the reduced range being narrower than the initial range; and
wherein the first and second ion samples are derived from the ions transmitted by the mass filter.

6. The mass spectrometer of claim 1 , wherein the mass analyser comprises one of: a time-of-flight type; an orbital trapping type; an electrostatic trap; and a Fourier Transform Ion Cyclotron Resonance, FT-ICR, type.

7. The mass spectrometer of claim 1 , wherein the processor is configured to provide the abundance measurement associated with at least some of the ions generated by the ion source, by adjusting the mass spectral data generated by the mass analyser on the basis of the ion current measurements determined by the auxiliary ion detector.

8. The mass spectrometer of claim 1 , wherein the first and second ion samples are samples of the same set of ions, the auxiliary ion detector being configured to determine a plurality of total ion current measurements for the set of ions, such that the processor is configured, for each of the plurality of total ion current measurements, to establish a plurality of abundance measurements for the set of ions, each abundance measurement being associated with a portion of the mass spectral data.

9. The mass spectrometer of claim 8 , wherein each abundance measurement is established by adjusting the respective portion of the mass spectral data based on at least one of the total ion current measurements.

10. The mass spectrometer of claim 1 , wherein the mass analyser is arranged to generate a plurality of sets of mass spectral data over a measurement time period and wherein the auxiliary ion detector is configured to determine a plurality of ion current measurements for each set of mass spectral data that is generated, the processor being configured thereby to establish a plurality of abundance measurements, each abundance measurements relating to a respective set of mass spectral data.

11. The mass spectrometer of claim 1 , wherein at least one of the plurality of first ion samples has the same range of mass-to-charge ratios as the second ion sample.

12. The mass spectrometer of claim 1 , wherein the ion source is configured to receive a plurality of samples over time and, for each received sample, to generate respective ions, the processor being configured to establish at least one abundance measurement for each of the plurality of samples.

13. A mass spectrometer, comprising:
an ion source, arranged to generate ions having an initial range of mass-to-charge ratios;
an auxiliary ion detector, located downstream from the ion source and arranged to receive a plurality of first ion samples derived from the ions generated by the ion source and to determine a respective ion current measurement for each of the plurality of first ion samples;
a mass analyser, located downstream from the ion source and arranged to receive a second ion sample derived from the ions generated by the ion source and to generate mass spectral data by mass analysis of the second ion sample; and
a processor configured to establish an abundance measurement associated with at least some of the ions generated by the ion source based on a combination of the mass spectral data generated by the mass analyser and the ion current measurements determined by the auxiliary ion detector, wherein the plurality of ion current measurements and the mass spectral data relate to ions generated over the same time period and wherein the processor is configured to use the plurality of ion current measurements to deconvolute the mass spectral data over the time period.

14. The mass spectrometer of claim 1 , wherein the mass analyser is further configured to adjust the abundance of ions in the second ion sample on the basis of the ion current determined for the first ion sample.

15. The mass spectrometer of claim 1 , further comprising:
a mass filter;
an ion storage device; and
a controller, configured to control the mass filter to select ions of a first range of mass-to-charge ratios, to control the auxiliary ion detector to determine an ion current for the ions of the first range of mass-to-charge ratios, to control the ion storage device to accumulate ions of the first range of mass-to-charge ratios in the ion storage device and to repeat selection, determining and accumulating until a threshold quantity of ions of the first range of mass-to-charge ratios are stored in the ion storage device, the controller being further configured to control the mass analyser to mass analyse the ions stored in the ion storage device.

16. The mass spectrometer of claim 15 , wherein the controller is further configured to control the mass filter to select ions of a second range of mass-to-charge ratios, to control the auxiliary ion detector to determine an ion current for the ions of the second range of mass-to-charge ratios, to control the ion storage device to accumulate ions of the second range of mass-to-charge ratios in the ion storage device and to repeat selection, determining and accumulating until a threshold quantity of ions of the second range of mass-to-charge ratios are stored in the ion storage device, wherein the

Assignees

• Thermo Fisher Scient (Bremen) Gmbh

Inventors

• Makarov Alexander Alekseevich

Classifications

• H01J49/425

  with a logarithmic radial electric potential, e.g. orbitraps · CPC title

• H01J49/009

  Spectrometers having multiple channels, parallel analysis · CPC title

• H01J49/005 Primary

  by collision with gas, e.g. by introducing gas or by accelerating ions with an electric field · CPC title

• H01J49/0077

  specific reactions other than fragmentation · CPC title

• H01J49/0036 Primary

  Step by step routines describing the handling of the data generated during a measurement · CPC title