Methods and systems for detecting genetic variants
US-2016046986-A1 · Feb 18, 2016 · US
Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform
US9529967B2 · US · B2
| Field | Value |
|---|---|
| Publication number | US-9529967-B2 |
| Application number | US-201614988687-A |
| Country | US |
| Kind code | B2 |
| Filing date | Jan 5, 2016 |
| Priority date | Jan 17, 2013 |
| Publication date | Dec 27, 2016 |
| Grant date | Dec 27, 2016 |
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Abstract
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A system, method and apparatus for executing a sequence analysis pipeline on genetic sequence data includes a structured ASIC formed of a set of hardwired digital logic circuits that are interconnected by physical electrical interconnects. One of the physical electrical interconnects forms an input to the structured ASIC connected with an electronic data source for receiving reads of genomic data. The hardwired digital logic circuits are arranged as a set of processing engines, each processing engine being formed of a subset of the hardwired digital logic circuits to perform one or more steps in the sequence analysis pipeline on the reads of genomic data. Each subset of the hardwired digital logic circuits is formed in a wired configuration to perform the one or more steps in the sequence analysis pipeline.
First claim
Opening claim text (preview).
What is claimed is: 1. A system for executing a sequence analysis pipeline on genetic sequence data, the system comprising: a memory for storing one or more genetic reference sequences, an index of the one or more genetic reference sequences, and a plurality of reads of genomic data, each of the genetic reference sequences and the plurality of reads of genomic data comprising a sequence of nucleotides; and a sequence analysis pipeline platform connected with the memory via a mem…
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Physics · mapped topic
Physics · mapped topic
- G16B50/00Primary
Physics · mapped topic
Electricity · mapped topic
Physics · mapped topic
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Frequently asked questions
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- What does patent US9529967B2 cover?
- A system, method and apparatus for executing a sequence analysis pipeline on genetic sequence data includes a structured ASIC formed of a set of hardwired digital logic circuits that are interconnected by physical electrical interconnects. One of the physical electrical interconnects forms an input to the structured ASIC connected with an electronic data source for receiving reads of genomic da…
- Who is the assignee on this patent?
- Edico Genome Inc, Edico Genome Corp
- What technology area does this patent fall under?
- Primary CPC classification G16B50/00. Mapped technology areas include Physics.
- When was this patent published?
- Publication date Tue Dec 27 2016 00:00:00 GMT+0000 (Coordinated Universal Time) (B2). Legal status and post-grant events are not shown on this page.
- What related patents are in patentsdb?
- We list 4 related publications on this page (citations in our corpus or others sharing the same primary CPC).