Multivolume devices, kits and related methods for quantification and detection of nucleic acids and other analytes

Patent metadata

Field	Value
Publication number	US-9493826-B2
Application number	US-201414177190-A
Country	US
Kind code	B2
Filing date	Feb 10, 2014
Priority date	Mar 24, 2009
Publication date	Nov 15, 2016
Grant date	Nov 15, 2016

Abstract

Provided are devices comprising multivolume analysis regions, the devices being capable of supporting amplification, detection, and other processes. Also provided are related methods of detecting or estimating the presence nucleic acids, viral levels, and other biological markers of interest.

First claim

What is claimed is:

1. A method of binary quantification of nucleic acids in a sample, comprising:
a. providing a microfluidic device comprising a first substrate comprising a first population of areas and a second substrate comprising a second population of areas;
b. partitioning a sample comprising nucleic acid molecules into said first and second populations of areas in said microfluidic device by exerting the sample through a conduit in fluidic communication with each area of the first population of areas and each area of the second population of areas via a continuous fluidic pathway within said first and second substrates, such that a plurality of said first and second populations of areas each comprise only one nucleic acid molecule;
c. loading nucleic acid amplification reagents into said microfluidic device;
d. effecting relative motion between the first substrate and the second substrate, thereby isolating the first population of areas from the second population of areas; and
e. conducting a nucleic acid amplification reaction in said microfluidic device in both said first and second populations of areas, wherein during said nucleic acid amplification reaction the temperature of said sample and the temperature of said nucleic acid amplification reagents remain within 10° C. of their temperature at the beginning of said nucleic acid amplification reaction.

2. The method of claim 1 , wherein said nucleic acid amplification reaction comprises loop mediated isothermal amplification.

3. The method of claim 1 , wherein said nucleic acid amplification reaction comprises reverse transcription loop mediated isothermal amplification.

4. The method of claim 1 , wherein said nucleic acid amplification reaction comprises nucleic acid sequence based amplification.

5. The method of claim 1 , wherein said nucleic acid amplification reaction comprises sequence-specific polymerase chain reaction.

6. The method of claim 1 , wherein said nucleic acid amplification reaction comprises transcription mediated amplification.

7. The method of claim 1 , wherein said nucleic acid amplification reaction comprises transcription associated amplification.

8. The method of claim 1 , wherein said nucleic acid amplification reaction comprises reverse transcription recombinase polymerase amplification.

9. The method of claim 1 , wherein said nucleic acid amplification reaction comprises strand displacement amplification.

10. The method of claim 1 , wherein said nucleic acid amplification reaction comprises signal mediated amplification of RNA technology.

11. The method of claim 1 , wherein said nucleic acid amplification reaction comprises cyclic enzymatic amplification method.

12. The method of claim 1 , wherein said nucleic acid amplification reaction comprises isothermal target and signaling probe amplification.

13. The method of claim 1 , wherein said nucleic acid amplification reaction comprises ligase chain reaction.

14. The method of claim 1 , wherein said microfluidic device comprises a heat control component.

Assignees

• California Inst Of Techn
• Univ Chicago

Inventors

• Ismagilov Rustem F
• Shen Feng
• Kreutz Jason E
• Du Wenbin
• Sun Bing

Classifications

• C12Q1/6851 Primary

  Quantitative amplification · CPC title

• C12Q2565/629

  being a microfluidic device · CPC title

• B01L2400/065

  sliding valves · CPC title

• B01L2400/0644

  rotary valves · CPC title

• B01L2300/0803

  Disc shape · CPC title