Using lexical analysis and parsing in genome research

US9104656B2 · US · B2

Patent metadata
FieldValue
Publication numberUS-9104656-B2
Application numberUS-201213541475-A
CountryUS
Kind codeB2
Filing dateJul 3, 2012
Priority dateJul 3, 2012
Publication dateAug 11, 2015
Grant dateAug 11, 2015

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Abstract

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Provided are techniques for locating one or more genome patterns. One or more lexical annotators that each identifies a sequence of nucleotides are created. One or more parsing rule annotators are created using at least one of (1) one or more of the lexical annotators, (2) one or more dictionary entries, and (3) one or more previously-defined parsing rule annotators. The one or more parsing rule annotators are used to discover the one or more genome patterns comprising a combination of the lexical annotators and the parsing rule annotators.

First claim

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The invention claimed is: 1. A computer system for locating a genome pattern, comprising: a processor; and a storage device connected to the processor, wherein the storage device has stored thereon a program, and wherein the processor is configured to execute instructions of the program to perform operations, wherein the operations comprise: creating one or more lexical annotators that each identify a sequence of nucleotides of nucleotide bases selected from A, C, G, and T;…

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What does patent US9104656B2 cover?
Provided are techniques for locating one or more genome patterns. One or more lexical annotators that each identifies a sequence of nucleotides are created. One or more parsing rule annotators are created using at least one of (1) one or more of the lexical annotators, (2) one or more dictionary entries, and (3) one or more previously-defined parsing rule annotators. The one or more parsing rul…
Who is the assignee on this patent?
Bowman Stephen D, Reddy Dandala V, Werts David B, and 1 more
What technology area does this patent fall under?
Primary CPC classification G06F40/205. Mapped technology areas include Physics.
When was this patent published?
Publication date Tue Aug 11 2015 00:00:00 GMT+0000 (Coordinated Universal Time) (B2). Legal status and post-grant events are not shown on this page.
What related patents are in patentsdb?
We list 8 related publications on this page (citations in our corpus or others sharing the same primary CPC).