Selection device for candidate sequence information for similarity determination, selection method, and use for such device and method
US-2015379197-A1 · Dec 31, 2015 · US
Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform
US9014989B2 · US · B2
| Field | Value |
|---|---|
| Publication number | US-9014989-B2 |
| Application number | US-201414180248-A |
| Country | US |
| Kind code | B2 |
| Filing date | Feb 13, 2014 |
| Priority date | Jan 17, 2013 |
| Publication date | Apr 21, 2015 |
| Grant date | Apr 21, 2015 |
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Abstract
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A system, method and apparatus for executing a sequence analysis pipeline on genetic sequence data includes an integrated circuit formed of a set of hardwired digital logic circuits that are interconnected by physical electrical interconnects. One of the physical electrical interconnects forms an input to the integrated circuit connected with an electronic data source for receiving reads of genomic data. The hardwired digital logic circuits are arranged as a set of processing engines, each processing engine being formed of a subset of the hardwired digital logic circuits to perform one or more steps in the sequence analysis pipeline on the reads of genomic data. Each subset of the hardwired digital logic circuits is formed in a wired configuration to perform the one or more steps in the sequence analysis pipeline.
First claim
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What is claimed is: 1. A system for executing a sequence analysis pipeline on genetic sequence data, the system comprising: an electronic data source that provides digital signals representing a plurality of reads of genomic data, each of the plurality of reads of genomic data comprising a sequence of nucleotides; a memory storing one or more genetic reference sequences and an index of the one or more genetic reference sequences; and an integrated circuit formed of a set of pr…
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- What does patent US9014989B2 cover?
- A system, method and apparatus for executing a sequence analysis pipeline on genetic sequence data includes an integrated circuit formed of a set of hardwired digital logic circuits that are interconnected by physical electrical interconnects. One of the physical electrical interconnects forms an input to the integrated circuit connected with an electronic data source for receiving reads of gen…
- Who is the assignee on this patent?
- Edico Genome Corp, Edico Genome Corp
- What technology area does this patent fall under?
- Primary CPC classification G06F19/22. Mapped technology areas include Physics.
- When was this patent published?
- Publication date Tue Apr 21 2015 00:00:00 GMT+0000 (Coordinated Universal Time) (B2). Legal status and post-grant events are not shown on this page.
- What related patents are in patentsdb?
- We list 8 related publications on this page (citations in our corpus or others sharing the same primary CPC).