Intermittent warming of a biologic sample including a nucleic acid

Patent metadata

Field	Value
Publication number	US-2023131184-A1
Application number	US-202017912189-A
Country	US
Kind code	A1
Filing date	Mar 30, 2020
Priority date	Mar 30, 2020
Publication date	Apr 27, 2023
Grant date	—

Abstract

Intermittent warming of a biologic sample including a nucleic acid includes receiving at a first end of a channel of a microfluidic device, a biologic sample including a nucleic acid, and warming a subset of a plurality of heating elements disposed adjacent to the channel. The method includes warming the heating elements to a particular temperature of a particular warming and cooling protocol. The method includes moving the biologic sample from the first end of the channel to a second end of the channel opposite the first end at a particular flow rate associated with the warming and cooling protocol, and intermittently warming the biologic sample using the subset of heating elements while the biologic sample moves from the first end of the channel to the second end of the channel.

First claim

1 . A method, comprising:
receiving at a first end of a channel of a microfluidic device, a biologic sample including a nucleic acid, the channel disposed along a planar surface within the microfluidic device; warming a subset of a plurality of heating elements disposed adjacent to the channel of the microfluidic device to a particular temperature of a particular warming and cooling protocol, the warming and cooling protocol associated with amplification of the nucleic acid; moving the biologic sample from the first end of the channel to a second end of the channel opposite the first end at a particular flow rate associated with the warming and cooling protocol; and intermittently warming the biologic sample using the subset of heating elements while the biologic sample moves from the first end of the channel to the second end of the channel.

2 . The method of claim 1 , wherein the subset of the plurality of heating elements is a first subset of the plurality of heating elements and the particular temperature is a first temperature, the method further including:
warming a second subset of the plurality of heating elements disposed adjacent to the channel of the microfluidic device to a second temperature of the particular warming and cooling protocol.

3 . The method of claim 1 , further including intermittently cooling, according to the particular warming and cooling protocol, the biologic sample using a cooling agent flowing through a plurality of cooling chambers disposed adjacent to the channel.

4 . The method of claim 1 , wherein the subset of the plurality of heating elements are a first subset of the plurality of heating elements and the particular temperature is a first temperature, the method including:
warming a second subset of the plurality of heating elements to a second temperature of a particular warming and cooling protocol; and not warming a third subset of the plurality of heating elements, the third subset of the plurality of heating elements associated with cooling zones of the microfluidic device.

5 . The method of claim 4 , including digitally controlling and monitoring the temperature of the plurality of heating elements.

6 . The method of claim 1 , wherein the microfluidic device includes a first chamber including a plurality of heating elements and a second chamber including a plurality of heating elements, and wherein intermittently warming the biologic sample using the subset of heating elements includes cycling the biologic sample between the first chamber and the second chamber a specified number of times according to the warming and cooling protocol.

7 . An apparatus, comprising:
a heatsink body; an insulating layer disposed along a planar surface within the heatsink body; a fluidic channel disposed within the insulating layer, the fluidic channel extending from a first end of the apparatus to a second end of the apparatus opposite the first end; a plurality of heating elements arranged within the insulating layer and adjacent to the fluidic channel, each of the plurality of heating elements independently controllable to heat a biologic sample including a nucleic acid; and a controller to control a temperature of the plurality of heating elements to heat and cool the biologic sample according to a particular warming and cooling protocol, the warming and cooling protocol associated with amplification of the nucleic acid.

8 . The apparatus of claim 7 , wherein the controller is to set the temperature of the plurality of heating elements in a pattern of temperature-controlled zones, and cooling zones.

9 . The apparatus of claim 7 , wherein the fluidic channel includes a plurality of adiabatic zones, a diameter of each of the adiabatic zones reduced relative to a diameter of a remainder of the fluidic channel.

10 . The apparatus of claim 7 , further including a plurality of liquid cooling elements disposed within the heatsink body and adjacent to the plurality of heating elements, each of the plurality of liquid cooling elements to selectively pass a liquid cooling agent along a plane orthogonal to a direction of a flow of the biologic sample.

11 . The apparatus of claim 7 , further including a transparent viewing window traversing a width of the heatsink body to the fluidic channel.

12 . An apparatus, comprising:
a heatsink body; an insulating layer disposed along a planar surface within the heatsink body; a plurality of temperature-controlled zones, including:
a fluidic channel disposed within the insulating layer, the fluidic channel extending from a first end of the apparatus to a second end of the apparatus opposite the first end, wherein the fluidic channel traverses from a first side of the insulating layer to a second side of the insulating layer in an alternating pattern;
each of the plurality of temperature-controlled zones including a plurality of heating elements arranged within the insulating layer and adjacent to the fluidic channel, each of the plurality of heating elements independently controllable to heat a biologic sample including a nucleic acid; and
a controller to control a temperature of the plurality of heating elements to heat and cool the biologic sample according to a particular warming and cooling protocol, the warming and cooling protocol associated with amplification of the nucleic acid.

13 . The apparatus of claim 12 , further including a plurality of cooling zones disposed between alternating temperature controlled zones, each of the plurality of cooling zones including a plurality of heating elements arranged within the insulating layer and adjacent to the fluidic channel, each of the plurality of heating elements independently controllable to heat a biologic sample including a nucleic acid.

14 . The apparatus of claim 12 , wherein the plurality of heating elements are arranged on opposing sides of the fluidic channel within the insulating layer, the controller to form a temperature-controlled zone by warming opposing heating elements.

15 . The apparatus of claim 12 , wherein the plurality of heating elements are arranged on opposing sides of the fluidic channel within the insulating layer, the controller to form a temperature-controlled zone by warming one heating element of a pair of opposing heating elements.

Assignees

• Hewlett Packard Development Co

Inventors

• Denison Carson
• Torniainen Erik
• Seaver Richard

Classifications

• B01L2300/1827

  using resistive heater · CPC title

• B01L2300/0864

  comprising only one inlet and multiple receiving wells, e.g. for separation, splitting · CPC title

• B01L2300/0816

  Cards, e.g. flat sample carriers usually with flow in two horizontal directions · CPC title

• B01L2300/1805

  Conductive heating, heat from thermostatted solids is conducted to receptacles, e.g. heating plates, blocks · CPC title

• B01L2300/087

  Multiple sequential chambers · CPC title