Method for detecting aggregates of biotherapeutic substances in a sample

Patent metadata

Field	Value
Publication number	US-2020200748-A1
Application number	US-201816612769-A
Country	US
Kind code	A1
Filing date	May 15, 2018
Priority date	Jun 13, 2017
Publication date	Jun 25, 2020
Grant date	—

Abstract

The invention relates to a method for detecting aggregates of biotherapeutic substances in a sample, said method involving the following steps: a) applying the sample to be examined to a substrate; b) adding probes which are labeled for the detection and which mark the aggregates of biotherapeutic substances by specifically binding thereto; and c) detecting the labeled aggregates of the biotherapeutic substances wherein step a) can be carried out prior to step b). A kit for carrying out said method is also disclosed.

First claim

1 . A method for detecting aggregates of biotherapeutic substances in a sample, comprising the following steps:
a. applying the sample to be examined onto a substrate, b. adding probe molecules which are suitable for detection and which mark the aggregates of biotherapeutic substances by specifically binding thereto, and c. detecting the marked aggregates of biotherapeutic substances, wherein step b) may be carried out before step a).

2 . The method according to claim 1 ,
wherein capture molecules for the aggregates are immobilized on the substrate before step a).

3 . The method according to claim 1 ,
wherein the sample is pretreated.

4 . The method according to claim 1 ,
wherein the substrate is made of glass.

5 . The method according to claim 1 ,
wherein the substrate is made of plastic.

6 . The method according to claim 1 ,
wherein the substrate has a hydrophilic coating.

7 . The method according to claim 1 ,
wherein the substrate is coated with dextran.

8 . The method according to claim 1 ,
wherein the substrate is coated with polyethylene glycol.

9 . The method according to claim 7 ,
wherein the dextran coating has a functionality for coupling biomolecules.

10 . The method according to claim 8 ,
wherein the polyethylene glycol coating has a functionality for coupling biomolecules.

11 . The method according to claim 1 ,
wherein the substrate is coated with a functionality for coupling biomolecules.

12 . The method according to claim 6 ,
wherein the hydrophilic coating is coated with a functionality for coupling biomolecules.

13 . The method according to claim 2 ,
wherein the capture molecules are bound to the substrate or to the coating.

14 . The method according to claim 2 ,
wherein the capture molecules are antibodies or fragments of antibodies.

15 . The method according to claim 2 ,
wherein the capture molecules are aptamers.

16 . The method according to claim 2 ,
wherein the capture molecules specifically bind one or more epitopes of the monomer of biotherapeutic substances.

17 . The method according to claim 2 ,
wherein the capture molecules specifically bind aggregates of biotherapeutic substances.

18 . The method according to claim 1 ,
wherein the probe molecules specifically bind one or more epitopes of the monomer of a biotherapeutic substance.

19 . The method according to claim 1 ,
wherein the probe molecules specifically bind aggregates of a biotherapeutic substance.

20 . The method according to claim 1 ,
wherein the probe molecules are marked with a detectable molecule.

21 . The method according to claim 1 ,
wherein the probe molecules are marked with fluorescent dyes.

22 . The method according to claim 1 ,
wherein one or more different probe molecules are used.

23 . The method according to claim 1 ,
wherein a mixture of various probe molecules with differently marked detectable molecules is used.

24 . The method according to claim 1 ,
wherein a mixture of identical probe molecules with differently marked detectable molecules is used.

25 . The method according to claim 1 ,
wherein detection is carried out by spatially resolving microscopy.

26 . The method according to claim 1 ,
wherein detection is carried out by spatially resolving fluorescence microscopy.

27 . The method according to claim 1 ,
wherein detection is carried out by confocal fluorescence microscopy, fluorescence correlation spectroscopy (FCS), optionally in combination with cross-correlation and single-particle-immunosolvent laser scanning assay, laser scanning microscopy (LSM), widefield microscopy and/or TIRF microscopy as well as the corresponding super-resolution variants STEP, SIM, STORM, dSTORM.

28 . The method according to claim 1 ,
wherein enough data points are collected during the detection that the detection of a single aggregate in front of the background signal is made possible.

29 . The method according to claim 1 ,
wherein an internal or external standard is used for quantifying and determining the size of aggregates of biotherapeutic substances.

30 . The method according to claim 29 ,
wherein the standard for quantifying and determining the size of aggregates of biotherapeutic substances consists of the monomers of the biotherapeutic substance.

31 . The method according to claim 29 ,
wherein the standard for quantifying and determining the size of aggregates of biotherapeutic substances consists of the monomers of the biotherapeutic substance and was covalently stabilized.

32 . The method according to claim 29 ,
wherein the standard for quantifying and determining the size of aggregates of biotherapeutic substances is a particle to which two or more identical or different polypeptide sequences are bound which are identical in sequence in the corresponding partial region of the sequences of the monomers of biotherapeutic substances bound by capture molecules and/or probe molecules.

33 . The method according to claim 29 ,
wherein the standard for quantifying and determining the size of aggregates of biotherapeutic substances is a particle to which two or more monomers of the biotherapeutic substance are bound.

34 . The method according to claim 32 ,
wherein the particle contains silica.

35 . The method according to claim 32 ,
wherein the particle has a hydrophilic coating.

36 . A kit for the selective quantification of aggregates of biopharmaceutical agents by a method according to claim 1 , the kit comprising one or more of the following components:
substrate; probe molecules which bind to the aggregates of biotherapeutic substances by specific binding; standard; and capture molecule.

Assignees

• Forschungszentrum Juelich Gmbh

Inventors

• Zafiu Christian
• Kulawik Andreas
• Bannach Oliver
• Willbold Dieter

Classifications

• G01N33/54393

  Improving reaction conditions or stability, e.g. by coating or irradiation of surface, by reduction of non-specific binding, by promotion of specific binding · CPC title

• G01N33/54353

  with ligand attached to the carrier via a chemical coupling agent (coatings G01N33/54393) · CPC title

• G01N33/582

  with fluorescent label · CPC title

• G01N33/6803

  General methods of protein analysis not limited to specific proteins or families of proteins · CPC title

• G01N2021/7786

  Fluorescence · CPC title