Methods and compositions for synthesis of two-photon cleavable phosphoramidite molecules for oligonucleotide conjugation
US-11938187-B2 · Mar 26, 2024 · US
US2016339106A1 · US · A1
| Field | Value |
|---|---|
| Publication number | US-2016339106-A1 |
| Application number | US-201414902514-A |
| Country | US |
| Kind code | A1 |
| Filing date | Jul 1, 2014 |
| Priority date | Jul 1, 2013 |
| Publication date | Nov 24, 2016 |
| Grant date | — |
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Described is a targeted molecular scaffold for construction of a metabolic inhibitor loaded with cancer-cell specific activity and anti-tumor immunity. Incorporation of a mitochondria targeting moiety such as triphenylphosphonium cation through a biodegradable linker in allowed for mitochondria targeting of certain metabolic inhibitors like dichloroacetic acid (DCA).
Opening claim text (preview).
1 . A compounds having Formula I: where TC is a mitochondria targeting moiety; IM is an inhibitor moiety; l is from 1 to 10; m is from 1 to 3; n is from 0 to 20; p is from 1 to 64; X 1 is —CO 2 —, —CO 2 CH 2 —, —CONR 3 —, —SO 2 NR 3 —, —CHR 3 —, —NHR 3 —, —CO—, or —O—; X 2 is —CONR 3 —, —SO 2 NR 3 —, —CHR 3 —, —NHR 3 —, —CO—, or —O—; X 3 is a linker; and R 1 , R 2 , and R 3 are, independently of one another, —H, —F, —Cl, —Br, —OH, —C 1-6 alkyl, or —OC(O)C 1-6 alkyl, or a pharmaceutically acceptable salt thereof. 2 . The compound of claim 1 , wherein m is 1, 2, or 3, X 1 is —CO 2 — or —CHR 3 —; X 2 is —CONR 3 —, —SO 2 NR 3 —, —CHR 3 —, —NHR 3 —, —CO—, or —O—; X 3 is —CO 2 —; R 1 , R 2 , and R 3 are each —H; p is 1; 1 is 1 to 5; and n is 0 to 3. 3 . The compound of claim 1 , wherein p is 1, 2, or 3, X 1 is —CO 2 — or —CHR 3 —; X 2 is —CONR 3 —, —SO 2 NR 3 —, —CHR 3 —, —NHR 3 —, —CO—, or —O—; X 3 is —CO 2 —; R 1 , R 2 , and R 3 are each —H; m is 1; 1 is 1 to 5; and n is 0 to 3. 4 . The compound of claim 1 , wherein TC is a cationic rhodamine moiety or a Szeto-Shiller peptide. 5 . The compound of claim 1 , wherein TC is a triphenyphosphonium moiety. 6 . The compound of claim 1 , wherein IM is lonidamine, dichloroacetate, alpha-tocopheryl succinate, methyl jasmonate, betulinic acid, and resveratrol, A-385358, ABT-263, ABT-737, AT-101, 2-amino-6-bromo-4-(1-cyano-2-ethoxy-2-oxoethyl)-4H-chromene-3-carboxylate (HA14-1), LDH-A shRNA, orlistat, SB-204990, soraphen A, 4-(N-(s-glutathionylacetate)aminophenylarsenoxide (GSAO), clodronate, PK11195, menadione, beta-lapachone, CD437, gamitrinibs, 8-(2-chloro-3,4,5-trimethoxybenzyl)-2-fluoro-9-(pent-4-nyl)-9H-purin-6-amine (PU24Fcl), (8-(6-bromobenzo[d][1,3,]dioxyl-5-ylthio)-9-(pent-4-nyl)-9H-purin-6-amine (PUH58), 8-(6-iodobenzo[d][1,3,]dioxyl-5-ylthio)-9-(3-isopropylamino)propyl-9H-purin-6-amine (PUH71), shepherdin, 2-methoxyestradiol, tetrathiomolybdate, buthionine sulphoximine, dimethylamino-parthenolide, parthenolide, imexons, magafodipir, menadione, motexafin gadolinium, PEITCs, elescomol (STA-4783), all trans-retinoic acid, 6-[3-(1-adamantyl)-4-hydroxyphenyl]-2-naphthalene carboxylic acid, E-3-(4′-hydroxy-3′-adamantylbiphenyl-4yl)acrylic acid, 3-bromopyruvate, butyric acid, 2-deoxyD-glucose, arsenite trioxide, or betulinic acid. 7 . The compound of claim 1 , wherein IM is dichloroacetyl. 8 . The compound of claim 1 , wherein the compound has Formula II: where l is from 1 to 10; m is from 1 to 3; n is from 0 to 20; p is from 1 to 64; X 1 is —CO 2 —, —CO 2 CH 2 —, —CONR 3 —, —SO 2 NR 3 —, —CHR 3 —, —NHR 3 —, —CO—, or —O—; X 2 is —CONR 3 —, —SO 2 NR 3 —, —CHR 3 —, —NHR 3 —, —CO—, or —O—; and R 1 , R 2 , and R 3 are, independently of one another, —H, —F, —Cl, —Br, —OH, —C 1-6 alkyl, or —OC(O)C 1-6 alkyl. 9 . The compound of claim 8 , wherein m is 1, 2, or 3, X 1 is —CO 2 — or —CHR 3 — and X 2 is —CONR 3 —, —SO 2 NR 3 —, —CHR 3 —, —NHR 3 —, —CO—, or —O—; R 1 , R 2 , and R 3 are each —H; p is 1; 1 is 1 to 5; and n is 0 to 3. 10 . The compound of claim 8 , wherein p is 1, 2, or 3, X 1 is —CO 2 — or —CHR 3 — and X 2 is —CONR 3 —, —SO 2 NR 3 —, —CHR 3 —, —NHR 3 —, —CO—, or —O—; and R 1 , R 2 , and R 3 are each —H; m is 1; 1 is 1 to 5; and n is 0 to 3. 11 . The compound of claim 8 , wherein m is 1, 2, or 3, X 1 is —CH 2 — and X 2 is —CONH—, and R 1 and R 2 are each —H; p is 1; 1 is 1 to 3; and n is 0. 12 . The compound of claim 8 , wherein p is 1, 2, or 3, X 1 is —CH 2 — and X 2 is —CONH—, and R 1 and R 2 are each —H; m is 1; 1 is 1 to 3; and n is 0. 13 . The compound of claim 1 , wherein the compound has Formula IV or V: where p is 1 to 64, and R 1 is C 1-3 alkyl or H. 14 . The compound of claim 1 , wherein the compound is: or a pharmaceutically acceptable sa thereof. 15 . A compound comprising from 4 to 64 triphenyl phosphenyl moieties and from 4 to 64 dichloroacetyl moieties. 16 . The compound of claim 15 having the structure 17 . The compound of claim 15 having the structure 18 . The compound of claim 15 having the structure 19 . A composition, comprising a compound of claim 1 and a pharmaceutically acceptable carrier. 20 . A nanoparticle comprising a hydrophobic core, a hydrophilic outer layer surrounding the core, and a compound of claim 1 . 21 . The nanoparticle of claim 20 , wherein the core comprises poly(lactic-co-glycolic) acid. 22 . The nanoparticle of claim 20 , wherein the hydrophilic outer layer comprises polyethylene glycol and is attached to the core. 23 . A method of treating or preventing cancer in a subject, comprising administering to the subject an effective amount of a compound or composition of claim 1 . 24 . The method of claim 23 , wherein the cancer is prostate cancer lung, breast, brain, ovarian, lymphoma, leukemia, head and neck, pancreatic, and cervical, colon and rectum, endrometrial, esophagous, liver, penile, skin-melanoma, skin-nonmelanoma, stomach, testicular, vaginal, uterine, vulvar, paranasal cancer, oropharyngeal and laryngeal cancers. 25 . The method of claim 23 , further comprising administering a second compound or composition, wherein the second compound or composition includes an anticancer agent. 26 . The method of claim 23 , further comprising administering an effective amount of ionizing radiation to the subject. 27 . A method of killing a tumor cell in a subject, comprising contacting the tumor cell with an effective amount of a compound or composition of claim 1 . 28 . The compound of claim 1 , wherein X 3 is CH 2 .
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