Systems and methods for sample concentration and detection using a separation liquid

Patent metadata

Field	Value
Publication number	US-2016310941-A1
Application number	US-201415105063-A
Country	US
Kind code	A1
Filing date	Dec 16, 2014
Priority date	Dec 20, 2013
Publication date	Oct 27, 2016
Grant date	—

Abstract

Systems and methods for concentrating a sample and detecting an analyte of interest using a separation liquid. The system can include a sample detection container that can include a microcavity. The microcavity can include a concentrate of a sample resulting from centrifugation of the sample. The container can further include a separation liquid located between the microcavity and a supernatant of the sample located outside of the microcavity. The separation liquid can have a density greater than that of the supernatant of the sample, and an interfacial tension with the supernatant of at least 0.05 N/m. The separation liquid can be non-toxic and inert. The method can include adding the separation liquid to the sample detection container, after centrifuging the sample detection container, to displace the supernatant located outside of the microcavity from the microcavity.

First claim

1 . A sample detection container adapted to contain and concentrate a sample for detection of an analyte of interest, if present, the container comprising:
an open end configured to receive a sample; a closed end that includes a microcavity, the microcavity including a top opening and a base and configured to provide capillary forces to retain a sample of interest, wherein the microcavity includes a concentrate of a sample resulting from centrifugation of the sample, and wherein the concentrate includes a sediment and at least a portion of a supernatant; and a separation liquid located in the container between the microcavity and the supernatant that is located outside of the microcavity; wherein the separation liquid has a density greater than that of the supernatant of the sample and an interfacial tension with the supernatant of at least 0.05 N/m, and wherein the separation liquid is non-toxic and inert.

2 . A method for detecting an analyte of interest in a sample, if present, the method comprising:
providing a sample detection container comprising:
an open end configured to receive a sample, and
a closed end that includes a microcavity, the microcavity including a top opening and a base and configured to provide capillary forces to retain a sample of interest;
positioning a sample in the sample detection container; centrifuging the sample detection container toward the microcavity to form a sediment and a supernatant of the sample; adding a separation liquid to the sample detection container, after centrifuging the sample detection container, to displace the supernatant located outside of the microcavity from the microcavity, such that a concentrate of the sample is retained in the microcavity, the concentrate comprising the sediment, wherein the separation liquid moves between the microcavity and the supernatant located outside of the microcavity; wherein the separation liquid has a density greater than that of the supernatant of the sample and an interfacial tension with the supernatant of at least 0.05 N/m, and wherein the separation liquid is non-toxic and inert.

3 . The sample detection container of claim 1 , wherein the separation liquid has a density of at least 1.2 g/ml.

4 . The sample detection container of claim 1 , wherein the separation liquid has a density of at least 0.2 g/ml greater than water.

5 . The sample detection container of claim 1 , wherein the separation liquid has a surface tension of no greater than 0.02 N/m.

6 . The sample detection container of claim 1 , wherein the separation liquid has an interfacial tension with the supernatant of at least 0.055 N/m.

7 . The sample detection container of claim 1 , wherein the sample is aqueous, and wherein the separation liquid has an interfacial tension with water of at least 0.05 N/m.

8 . The sample detection container of claim 1 , wherein the sample is aqueous, and wherein the separation liquid has an interfacial tension with water of at least 0.055 N/m.

9 . The sample detection container of claim 1 , wherein the separation liquid has a solubility in water of less than 1%.

10 . The sample detection container of claim 1 , wherein the separation liquid is colorless.

11 . The sample detection container of claim 1 , wherein the separation liquid includes a fluorocarbon-based liquid.

12 . The sample detection container of claim 1 , wherein the microcavity is a single microcavity.

13 . The sample detection container of claim 1 , wherein the microcavity is one of a plurality of microcavities.

14 . The sample detection container of claim 1 , wherein the microcavity contains a volume of no greater than 1 microliter.

15 . The sample detection container of claim 1 , wherein the microcavity has a frustoconical shape or a frustopyramidal shape.

16 . The sample detection container of claim 1 , and wherein the microcavity includes a sidewall, and wherein the sidewall includes a draft angle of at least 10 degrees.

17 . The sample detection container of claim 1 , wherein an inner surface of the container has a static water surface contact angle of at least 65 degrees.

18 . The sample detection container of claim 1 , wherein an inner surface of the container has a dynamic receding water surface contact angle of at least 25 degrees.

19 . The sample detection container of claim 1 , wherein an inner surface of the container has a surface roughness characterized by a roughness average (Ra) value of less than 500 nm.

20 . A system for detecting an analyte of interest in a sample, if present, the system comprising:
a first container assembly comprising a filter portion, the filter portion comprising a filter, the filter having a first side and comprising a filtrand of the sample on the first side; and a second container assembly comprising the filter portion coupled to the sample detection container of claim 1 , the filter portion and the sample detection container being coupled together such that the first side of the filter faces the microcavity of the sample detection container.

21 . The method of claim 2 , wherein positioning a sample in the sample detection container includes:
providing a first container assembly comprising a filter portion, the filter portion comprising a filter configured to retain the analyte of interest from the sample, the filter having a first side and comprising a filtrand of the sample on the first side; and coupling the filter portion to the sample detection container to form a second container assembly, the filter portion and the sample detection container being coupled together such that the first side of the filter faces the microcavity of the sample detection container.

22 . The method of claim 2 , wherein positioning a sample in the sample detection container includes:
providing a first container assembly comprising a receptacle portion adapted to contain the sample and a filter portion adapted to be removably coupled to the receptacle portion, the filter portion comprising a filter configured to retain the analyte of interest from the sample, the filter having a first side; filtering the sample by moving the sample in a first direction from the receptacle portion toward the first side of the filter to form a filtrand of the sample on the first side of the filter, while removing a filtrate of the sample; and decoupling the receptacle portion and the filter portion of the first container assembly; coupling the filter portion to the sample detection container to form a second container assembly, the filter portion and the sample detection container being coupled together such that the first side of the filter faces the microcavity of the sample detection container.

Assignees

• 3M Innovative Properties Co

Inventors

• Rajagopal Raj
• Halverson Kurt J

Classifications

• B01L2400/0409

  centrifugal forces · CPC title

• B01L2200/0605

  Metering of fluids · CPC title

• C12Q1/24

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• B01L2300/161

  Control and use of surface tension forces, e.g. hydrophobic, hydrophilic · CPC title

• B01L2200/0631

  Purification arrangements, e.g. solid phase extraction [SPE] · CPC title