Chimeric fibroblast growth factor (fgf) 2/fgf1 peptides and methods of use

Patent metadata

Field	Value
Publication number	US-2016237133-A1
Application number	US-201615092097-A
Country	US
Kind code	A1
Filing date	Apr 6, 2016
Priority date	Oct 21, 2013
Publication date	Aug 18, 2016
Grant date	—

Abstract

The present disclosure provides chimeric proteins having an N-terminus coupled to a C-terminus, wherein the N-terminus comprises an N-terminal portion of fibroblast growth factor (FGF) 2 and the C-terminus comprises a portion of an FGF1 protein. Such FGF2/FGF1 chimeras can further include a fibroblast growth factor receptor (FGFR) 1c-binding protein, a β-Klotho-binding protein, or both. Also provided are nucleic acid molecules that encode such proteins, and vectors and cells that include such nucleic acids. Methods of using the disclosed molecules to reduce blood glucose levels are also provided.

First claim

We claim:

1 . A chimeric protein comprising:
an N-terminus coupled to a C-terminus, wherein the N-terminus comprises an N-terminal portion of fibroblast growth factor (FGF) 2 protein and the C-terminus comprises a portion of an FGF1 protein.

2 . The chimeric protein of claim 1 , wherein the N-terminus comprises at least 12 consecutive amino acids from amino acids 1-30 of FGF2 and the C-terminus comprises at least 120 consecutive amino acids from amino acids 5-141 of FGF1, wherein the at least 12 consecutive amino acids from amino acids 1-30 of FGF2 can comprise 1, 2, 3 or 4 point mutations, and wherein the at least 120 consecutive amino acids from amino acids 5-141 of FGF1 can comprise 1-20 point mutations.

3 . The chimeric protein of claim 2 , wherein the at least 12 consecutive amino acids from amino acids 1-30 of FGF2 comprise or consist of:
MAAGSITTLP ALPEDGGSGA F (amino acids 1 to 21 of SEQ ID NO: 2), MAASGITSLP ALPEDGGAAF (amino acids 1 to 20 of SEQ ID NO: 4), PALPEDGGSGAF (amino acids 10 to 21 of SEQ ID NO: 2), or PALPEDGGAAF (amino acids 10 to 20 of SEQ ID NO: 4).

4 . The chimeric protein of claim 2 , wherein the at least 12 consecutive amino acids from amino acids 1-30 of FGF2 comprising 1, 2, 3 or 4 point mutations comprise or consist of:
MAAGSITTLP ALPEDGGSFA F (amino acids 1 to 21 of SEQ ID NO: 10); MAAGSITTLP ALPEDGGSFNL (amino acids 1 to 21 of SEQ ID NO: 11); PALPEDGGSFAF (amino acids 10 to 21 of SEQ ID NO: 10); PALPEDGGSFNL (amino acids 10 to 21 of SEQ ID NO: 11); MPALPEDGGSGAF (amino acids 1 to 13 of SEQ ID NO: 13); MPALPEDGGAAF (amino acids 1 to 12 of SEQ ID NO: 28); MPALPEDGFAAF (amino acids 1 to 12 of SEQ ID NO: 29); or MPALPEDGFFSGAF (amino acids 1 to 14 of SEQ ID NO: 30).

5 . The chimeric protein of claim 2 , wherein the at least at least 120 consecutive amino acids of FGF1 comprise or consist of:

(amino acids 4 to 140 of SEQ ID NO: 14)

PPGNYK KPKLLYCSNG GHFLRILPDG TVDGTRDRSD QHIQLQLSAE

SVGEVYIKST ETGQYLAMDT DGLLYGSQTP NEECLFLERL

EENHYNTYIS KKHAEKNWFVGLKKNGSCKR GPRTHYGQKA

ILFLPLPVSSD;

the protein sequence shown in SEQ ID NO: 14;
the protein sequence shown in SEQ ID NO: 15;
the protein sequence shown in SEQ ID NO: 16;
the protein sequence shown in SEQ ID NO: 17; or
the protein sequence shown in SEQ ID NO: 27.

6 . The chimeric protein of claim 2 , wherein the at least at least 120 consecutive amino acids from amino acids 5-141 of FGF1 comprising 1-20 point mutations comprise or consist of:
the protein sequence shown in SEQ ID NO: 18; the protein sequence shown in SEQ ID NO: 19; the protein sequence shown in SEQ ID NO: 20; the protein sequence shown in SEQ ID NO: 21; or the protein sequence shown in SEQ ID NO: 37, 38, 39, 40, 41, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 95, 97, 98, 168, 169, 170, 171, 172, 173, 174, or 175.

7 . The chimeric protein of claim 1 , wherein the N-terminal amino acid is a methionine.

8 . The chimeric protein of claim 1 , wherein the portion of the FGF1 protein is modified to decrease binding affinity for heparin and/or heparan sulfate compared to the portion of the FGF1 protein without the modification.

9 . The chimeric protein of claim 1 , further comprising:
one or more β-Klotho-binding proteins at the N-terminus or the C-terminus; one or more fibroblast growth factor receptor (FGFR) 1c-binding proteins at the N-terminus or the C-terminus; one or more β-Klotho-binding proteins and one or more fibroblast growth factor receptor (FGFR) 1c-binding proteins at the N-terminus or the C-terminus; or one or more β-Klotho-binding proteins and one or more fibroblast growth factor receptor (FGFR) 1c-binding proteins at the N-terminus and the C-terminus.

10 . The chimeric protein of claim 1 , wherein the chimeric protein is
130-160 amino acids in length; 200 to 400 amino acids in length; 300 to 375 amino acids in length; or 250 to 300 amino acids in length.

11 . The chimeric protein of claim 1 , wherein the chimeric protein comprises at least 80%, at least 85%, at least 90%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to any of SEQ ID NOS: 9, 10, 11, 12, 13, 99, 100, 101, 102, 103, 104, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166 and 167.

12 . An isolated nucleic acid encoding the chimeric protein of claim 1 .

13 . A nucleic acid vector comprising the isolated nucleic acid of claim 12 .

14 . A host cell comprising the vector of claim 13 .

15 . The host cell of claim 13 , wherein the host cell is a bacterium or yeast cell.

16 . The host cell of claim 15 , wherein the bacterium is E. coli.

17 . A method of reducing blood glucose in a mammal, comprising:
administering a therapeutically effective amount of the protein of claim 1 to the mammal, thereby reducing the blood glucose.

18 . A method of treating a metabolic disease in a mammal, comprising:
administering a therapeutically effective amount of the protein of claim 1 to the mammal, thereby treating the metabolic disease.

19 . The method of claim 18 , wherein the metabolic disease is type 2 diabetes, non-type 2 diabetes, type 1 diabetes, polycystic ovary syndrome (PCOS), metabolic syndrome (MetS), obesity, non-alcoholic steatohepatitis (NASH), non-alcoholic fatty liver disease (NAFLD), hyperlipidemia, hypertension, latent autoimmune diabetes (LAD), or maturity onset diabetes of the young (MODY).

20 . A method of reducing fed and fasting blood glucose, improving insulin sensitivity and glucose tolerance, reducing systemic chronic inflammation, ameliorating hepatic steatosis in a mammal, or combinations thereof, comprising:
administering a therapeutically effective amount of the protein of claim 1 to the mammal, thereby reducing fed and fasting blood glucose, improving insulin sensitivity and glucose tolerance, reducing systemic chronic inflammation, and ameliorating hepatic steatosis in a mammal, or combinations thereof.

21 . The method of claim 17 , wherein the therapeutically effective amount of the protein is at least 0.5 mg/kg.

22 . The method of claim 17 , wherein the administering is subcutaneous, intraperitoneal, intramuscular, or intravenous.

23 . The method of claim 17 , wherein the mammal is a cat or dog.

24 . The method of claim 17 , wherein the mammal is a human.

25 . The method of claim 17 , wherein the method further comprises administering an additional therapeutic compound.

26 . The method of claim 25 , wherein the additional therapeutic compound is one or more of an alpha-glucosidase inhibitor, amylin agonist, dipeptidyl-peptidase 4 (DPP-4) inhibitor, me

Assignees

• Salk Inst For Biological Studi

Inventors

• Suh Jae Myoung
• Downes Michael
• Evans Ronald M
• Atkins Annette

Classifications

• A61P3/08

  for glucose homeostasis (pancreatic hormones A61P5/48) · CPC title

• C07K2319/00

  Fusion polypeptide · CPC title

• C07K14/501

  acidic FGF [aFGF] · CPC title

• C07K14/503 Primary

  basic FGF [bFGF] · CPC title

• A61K45/06

  Mixtures of active ingredients without chemical characterisation, e.g. antiphlogistics and cardiaca · CPC title