Selective oxidation of 5-methylcytosine by tet-family proteins
US-2019062817-A1 · Feb 28, 2019 · US
US12391990B2 · US · B2
| Field | Value |
|---|---|
| Publication number | US-12391990-B2 |
| Application number | US-202017621996-A |
| Country | US |
| Kind code | B2 |
| Filing date | Jun 24, 2020 |
| Priority date | Jun 24, 2019 |
| Publication date | Aug 19, 2025 |
| Grant date | Aug 19, 2025 |
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The presently-disclosed subject matter includes methods for detecting methylation biomarkers in a biological sample from a subject in need of assessment for magnesium deficiency status, methods of diagnosing magnesium deficiency, methods of diagnosing magnesium insufficiency, methods of treating magnesium deficiency, methods of diagnosing magnesium insufficiency, and methods of preventing or reducing a risk of developing a condition linked to magnesium deficiency.
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What is claimed is: 1. A method for predicting and treating magnesium deficiency in a subject, said method comprising: a) detecting methylation at CpG sites in DNA obtained from a biological sample from the subject, wherein the subject is in need of assessment for magnesium deficiency status; and b) identifying the subject as being in need of magnesium supplementation when methylation is found at the CpG site: cg00430271 or cg25731074; and c) administering an effective amount of magnesium to the identified subject. 2. The method of claim 1 , and further comprising detecting 5-hydroxymethylcytosine (5-hmC) and 5-methylcytosine (5-mC) methylation in the DNA obtained from the biological sample from the subject and differentiating between 5-hmC and 5-mC methylation in the sample. 3. The method of claim 1 , further comprising detecting 5-hmC and 5-mC methylation, 5-hmC methylation, or 5-mC methylation by performing bisulfite (BS) treatment of the DNA in the biological sample. 4. The method of claim 2 , further comprising differentiating between 5-hmC and 5-mC methylation in the biological sample using a TAB-Seq and TAB-Array protocol. 5. The method of claim 1 , and further comprising determining for the subject a magnesium tolerance test (MTT) score, where an MTT score of greater than or equal to 50% is further indicative of a magnesium deficiency, an MTT score of less than 50% and greater than or equal to 25% is further indicative of a magnesium insufficiency, and an MTT score of less than 25% is further indicative of a magnesium sufficiency. 6. The method of claim 1 , and further comprising identifying the subject as being in need of magnesium supplementation when methylation is found at the CpG sites comprising: cg00430271 and cg25731074. 7. The method of claim 6 , and further comprising administering an effective amount of magnesium to the identified subject. 8. The method of claim 1 , wherein the biological sample includes blood leukocyte DNA. 9. The method of claim 1 , and further comprising identifying the subject as being in need of magnesium supplementation when methylation is found at the CpG sites comprising: cg00430271, cg11840205, and cg25731074. 10. The method of claim 9 , and further comprising administering an effective amount of magnesium to the identified subject. 11. The method of claim 1 , and further comprising identifying the subject as being in need of magnesium supplementation when methylation is found at the CpG sites comprising: cg00430271, cg04386563, cg11840205, and cg25731074. 12. The method of claim 11 , and further comprising administering an effective amount of magnesium to the identified subject. 13. The method of claim 1 , and further comprising determining Ca:Mg ratio of the diet of the subject, and selecting the effective amount of magnesium to decrease the Ca:Mg ratio.
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