Light sheet microscope and method for light sheet microscopy

Patent metadata

Field	Value
Publication number	US-12007545-B2
Application number	US-202117513833-A
Country	US
Kind code	B2
Filing date	Oct 28, 2021
Priority date	Oct 29, 2020
Publication date	Jun 11, 2024
Grant date	Jun 11, 2024

Abstract

In a light sheet microscope, a detection device images a sample volume and an illumination device illuminates the sample with a light sheet. A light sheet plane is arranged substantially perpendicularly to the optical imaging axis and an illumination width extends perpendicular to the light sheet plane. A processing device is provided to control setting of the location of the light sheet plane in the sample volume, and recording a plurality of images of the sample volume with different locations of the light sheet plane. For the plurality of images recorded, a spacing, which is measured along the optical imaging axis, between adjacent locations of the light sheet plane is greater than or equal to half the illumination width, but not greater than the illumination width. Intermediate images for the stack of images in additional locations of the light sheet plane in the sample volume are computed.

First claim

What is claimed is:

1. A light sheet microscope, comprising:
a sample volume, including a sample stage for a sample carrier with a sample;
a detection device comprising a camera that images the sample volume along an optical imaging axis;
an illumination device comprising cylindrical optics or a scanned laser beam which illumination device illuminates the sample with a light sheet, comprising a light sheet plane that is adjustable in the sample volume, wherein the light sheet plane is arranged substantially perpendicularly to the optical imaging axis and the light sheet has an illumination width extending perpendicular to the light sheet plane; and
a processing device comprising a computing unit and a wired or wireless, connection to the detection device and further to the illumination device or to the sample stage or to both, wherein the processing device is configured to:
control the illumination device or the sample stage or both to set a location of the light sheet plane sequentially to different locations of the light sheet plane of the light sheet in the sample volume,
control the detection device to record an image of the sample volume for each of the different locations of the light sheet plane, whereby a stack of a plurality of images of the sample volume is produced, with each image in the stack corresponding to a single one of the different locations of the light sheet plane,
control the illumination device or the sample stage or both such that for the plurality of images recorded a spacing, which is measured along the optical imaging axis, between adjacent locations of the different locations of the light sheet plane is greater than or equal to half the illumination width, but not greater than the illumination width, and
compute intermediate images for the stack, each of the intermediate images corresponding to a virtual additional location of the light sheet plane in the sample volume.

2. The light sheet microscope as claimed in claim 1 , wherein the processing device is further configured to control the illumination device to provide the illumination structured along the optical imaging axis during the producing of the stack.

3. The light sheet microscope as claimed in claim 1 , wherein the camera has a field of view and the processing device is further configured to control the illumination device and the detection device to illuminate only regions of the sample volume that are in the field of view.

4. A method for light sheet microscopy, comprising:
illuminating a sample with a light sheet comprising a light sheet plane, wherein the light sheet plane is arranged substantially perpendicularly to an optical imaging axis and the light sheet has an illumination width extending perpendicular to the light sheet plane;
setting the light sheet plane sequentially to different locations of the light sheet plane of the light sheet in the sample;
recording an image of the sample for each of the different locations of the light sheet plane, thereby producing a stack comprising of a plurality of images of the sample, with each image in the stack corresponding to a single one of the different locations of the light sheet plane,
wherein a spacing, measured along the optical imaging axis, between adjacent locations of the different locations of the light sheet plane is greater than or equal to half the illumination width, but not greater than the illumination width; and
computing intermediate images, each of the intermediate images corresponding to a virtual additional location of the light sheet plane in the sample.

5. The method for light sheet microscopy as claimed in claim 4 , wherein the illumination is structured along the optical imaging axis during the producing of the stack.

6. The method for light sheet microscopy as claimed in claim 4 , wherein only the regions of the sample volume that are detected are illuminated.

7. A light sheet microscope, comprising:
a sample volume, comprising a sample stage for a sample carrier with a sample;
a detector that images the sample volume along an optical imaging axis;
an illumination source that illuminates the sample with a light sheet, comprising a light sheet plane that is adjustable in the sample volume, wherein the light sheet plane is arranged substantially perpendicularly to the optical imaging axis, and wherein the light sheet has an illumination width extending perpendicular to the light sheet plane; and
a processor, which is connected to the detector, and is connected to the illumination source or to the sample stage or to both,
wherein the processor is configured to:
control the illumination source or the sample stage, or both, to set a location of the light sheet plane sequentially to different locations of the light sheet plane of the light sheet in the sample volume,
control the detector to record an image of the sample volume for each of the different locations of the light sheet plane, whereby a stack of a plurality of images of the sample volume is produced, with each image in the stack corresponding to a single one of the different locations of the light sheet plane,
control the illumination source or the sample stage, or both, such that for the plurality of images recorded a spacing, which is measured along the optical imaging axis, between adjacent locations of the different locations of the light sheet plane is greater than or equal to half the illumination width, but not greater than the illumination width, and
compute intermediate images for the stack, each of the intermediate images corresponding to a virtual additional location of the light sheet plane in the sample volume.

8. The light sheet microscope as claimed in claim 7 , wherein the processor is further configured to control the illumination source to provide the illumination structured along the optical imaging axis during the producing of the stack.

9. The light sheet microscope as claimed in claim 7 , wherein the processor is further configured to control the illumination source and the detector to illuminate at each of the different locations of the light sheet plane only regions of the sample volume for which the image is being recorded.

Assignees

• Zeiss Carl Microscopy Gmbh

Inventors

• Netz Ralf
• Siebenmorgen Joerg

Classifications

• H04N23/74

  by influencing the scene brightness using illuminating means · CPC title

• G02B21/0032 Primary

  Optical details of illumination, e.g. light-sources, pinholes, beam splitters, slits, fibers (G02B21/0036 - G02B21/008; means for illumination of specimens in general G02B21/06) · CPC title

• G02B21/26

  Stages; Adjusting means therefor · CPC title

• G02B21/365

  Control or image processing arrangements for digital or video microscopes (G02B21/361, G02B21/362 take precedence) · CPC title

• G01N21/01

  Arrangements or apparatus for facilitating the optical investigation · CPC title