Tie2-binding agents and methods of use

Patent metadata

Field	Value
Publication number	US-11999787-B2
Application number	US-202117208292-A
Country	US
Kind code	B2
Filing date	Mar 22, 2021
Priority date	Mar 24, 2020
Publication date	Jun 4, 2024
Grant date	Jun 4, 2024

Abstract

The invention provides Tie-2 antibodies and fragments thereof and conjugates and methods of using the same.

First claim

What is claimed is:

1. A conjugate that binds to Tie2, wherein the conjugate comprises two, three, four, five, six, seven, or eight antibodies or antigen-binding fragments thereof, wherein each of the antibodies or fragments thereof bind Tie2 and comprises:
a heavy chain variable domain (VH) comprising (a) CDR-H1 comprising the amino acid sequence NTDIS (SEQ ID NO:3), (b) CDR-H2 comprising the amino acid sequence RISPSDGNTYYADSVKG (SEQ ID NO:4), and (c) CDR-H3 comprising the amino acid sequence RTRWASWAFDY (SEQ ID NO:7), and a light chain variable domain (VL) comprising (d) CDR-L1 comprising the amino acid sequence RASQDVSTAVA (SEQ ID NO:8), (e) CDR-L2 comprising the amino acid sequence SASFLYS (SEQ ID NO:9), and (f) CDR-L3 comprising the amino acid sequence QQSYTTPPT (SEQ ID NO:10), and
wherein each of the antibodies or antigen-binding fragment thereof is linked to a multimerizing moiety.

2. The conjugate of claim 1 , wherein the multimerizing moiety comprises a polyol, wherein the polyol is a is a multi-armed polyol, selected from a dimer, a tetramer, a hexamer, and an octamer.

3. The conjugate of claim 2 , wherein the multi-armed polyol is a hexamer.

4. The conjugate of claim 2 , wherein the polyol is a polyethylene glycol (PEG).

5. The conjugate of claim 4 , wherein the PEG has a weight average molecular weight of from about 500 Daltons (Da) to about 300,000 Da.

6. The conjugate of claim 4 , wherein the PEG has the structure of general formula (Ib):

wherein each m is independently an integer from 3-250; each R 1 is independently either absent or is a linking group; and each R 2 is independently either hydrogen or a terminal reactive group;
wherein at least one R 2 is a terminal reactive group and is covalently linked to the antibody or antigen-binding fragment thereof.

7. The conjugate according to claim 6 , wherein at least one R 1 is a linking group, wherein R 1 and R 2 when taken together are selected from:

and combinations thereof; wherein each i is independently an integer of 0-10; j is an integer of 0-10; and R 2 is a terminal reactive group selected from the group consisting of a thiol reactive group, an amino reactive group, and combinations thereof.

8. The conjugate of claim 6 , wherein each R 2 is a maleamide and is covalently linked to the antibody or antigen-binding fragment thereof.

9. The conjugate of claim 2 , wherein each of the antibodies or antigen-binding fragment thereof is a Fab and the polyol is covalently linked to the Fab through a free sulfhydryl group of an engineered cysteine amino acid, wherein the engineered cysteine is selected from the group consisting of
T120C, G166C, G178C, T187C, and T209C in the heavy chain (HC); or
the engineered cysteine is selected from the group consisting of Q124C, R142C, Q155C, L201C, T206C, K107C, K126C, and K149C in the light chain (LC);
wherein the residue number is according to EU numbering.

10. The conjugate of claim 9 , wherein the engineered cysteine is T209C in the HC, wherein the residue number is according to EU numbering.

11. A pharmaceutical composition comprising the conjugate of claim 1 and a pharmaceutically acceptable carrier.

12. The conjugate of claim 1 , wherein the VH of each of the antibodies or antigen-binding fragments thereof comprises SEQ ID NO:20 and the VL of each of the antibodies or antigen-binding fragments thereof comprises SEQ ID NO:21.

13. The conjugate of claim 12 , wherein each of the antibodies or antigen-binding fragments thereof is a Fab comprising the Fab HC sequence of SEQ ID NO: 55 and the Fab LC sequence of SEQ ID NO:25.

14. A conjugate which binds Tie2 comprising:
a Fab comprising a heavy chain (HC) having SEQ ID NO:55 and a light chain (LC) having SEQ ID NO:25; conjugated to a polyol which has the structure of Formula 1 (b)

wherein each m is independently an integer from 10-30, wherein R 1 and R 2 taken together has the structure

wherein R 2 is a maleamide; and
wherein the polyol is linked to the Fab HC at residue C209 (EU numbering).

15. A pharmaceutical composition comprising the conjugate of claim 14 and a pharmaceutically acceptable carrier.

16. A conjugate that binds to Tie2,
wherein the conjugate comprises six Fabs that bind Tie2, wherein each of the six Fabs comprises:
a heavy chain variable domain (VH) comprising (a) CDR-H1 comprising the amino acid sequence NTDIS (SEQ ID NO:3), (b) CDR-H2 comprising the amino acid sequence RISPSDGNTYYADSVKG (SEQ ID NO:4), and (c) CDR-H3 comprising the amino acid sequence RTRWASWAFDY (SEQ ID NO:7), and a light chain variable domain (VL) comprising (d) CDR-L1 comprising the amino acid sequence RASQDVSTAVA (SEQ ID NO:8), (e) CDR-L2 comprising the amino acid sequence SASFLYS (SEQ ID NO:9), and (f) CDR-L3 comprising the amino acid sequence QQSYTTPPT (SEQ ID NO:10), and
wherein each of the Fabs is linked to an arm of a hexameric polyethylene glycol (PEG) molecule.

17. The conjugate of claim 16 , wherein each of the Fabs is linked to the arm of the PEG through a free sulfhydryl group of an engineered cysteine amino acid, wherein
the engineered cysteine is selected from the group consisting of T120C, G166C, G178C, T187C, and T209C in the Fab heavy chain (HC); or
the engineered cysteine is selected from the group consisting of Q124C, R142C, Q155C, L201C, T206C, K107C, K126C, and K149C in the Fab light chain (LC);
wherein the residue number is according to EU numbering.

18. The conjugate of claim 17 , wherein the engineered cysteine is T209C in the HC, wherein the residue number is according to EU numbering.

19. The conjugate of claim 17 , wherein the PEG has a weight average molecular weight of from about 500 Daltons (Da) to about 300,000 Da.

20. The conjugate of claim 19 , wherein the PEG has the structure of general formula (Ib):

wherein each m is independently an integer from 3-250; each R 1 is independently either absent or is a linking group; and each R 2 is independently either hydrogen or a terminal reactive group; and
wherein at least one R 2 is a terminal reactive group and is covalently linked to the antibody or antigen-binding fragment thereof.

21. The conjugate of claim 20 , wherein the VH of each of the six Fabs comprises SEQ ID NO:20 and the VL of each of the six Fabs comprises SEQ ID NO:21.

22. The conjugate of claim 21 , wherein the Fab HC of each of the six Fabs comprises the sequence of SEQ ID NO:55 and the Fab LC of each of the six Fabs comprises the sequence of SEQ ID NO:25.

23. The conjugate of claim 22 , wherein the PEG has a weight average molecular weight of from about 1000 Daltons (Da) to about 10,000 Da.

24. The conjugate of claim 23 , wherein each of the six Fabs is linked to the arm of the PEG through a free sulfhydryl group of an engineered cysteine amino acid in each of the six Fabs, wherein the engineered cysteine is T209C in the Fab heavy chain (HC), wherein the residue nu

Assignees

• Genentech Inc

Inventors

• Yan Minhong
• Zhang Gu
• Agard Nicholas John
• Dicara Danielle Marie
• Hass Philip E
• Hang Julie Q
• Christensen Erin L
• Morse Robert Paul
• Sanowar Sarah
• Shivva Vittal

Classifications

• A61K2039/54

  characterised by the route of administration · CPC title

• A61K2039/505

  comprising antibodies · CPC title

• C07K2317/565

  Complementarity determining region [CDR] · CPC title

• C07K2317/21

  from primates, e.g. man · CPC title

• C07K2317/76

  Antagonist effect on antigen, e.g. neutralization or inhibition of binding · CPC title