Bispecific antigen binding molecules targeting OX40 and FAP

Patent metadata

Field	Value
Publication number	US-11780919-B2
Application number	US-202117218948-A
Country	US
Kind code	B2
Filing date	Mar 31, 2021
Priority date	Apr 1, 2020
Publication date	Oct 10, 2023
Grant date	Oct 10, 2023

Abstract

The invention relates to novel bispecific antigen binding molecules, comprising at least two antigen binding domains capable of specific binding to OX40 and a particular antigen binding domain capable of specific binding to Fibroblast Activation Protein (FAP), and to methods of producing these molecules and to methods of using the same.

First claim

The invention claimed is:

1. A bispecific antigen binding molecule, comprising:
(a) at least two antigen binding domains capable of specific binding to OX40, wherein the antigen binding domain capable of specific binding to OX40 comprises
(i) a heavy chain variable region (V H OX40) comprising:
(i) CDR-H1 comprising the amino acid sequence of SEQ ID NO:35,
(ii) CDR-H2 comprising the amino acid sequence of SEQ ID NO:36, and
(iii) CDR-H3 comprising the amino acid sequence of SEQ ID NO:37,

and a light chain variable region (V L OX40) comprising:
(iv) CDR-L1 comprising the amino acid sequence of SEQ ID NO:38,
(v) CDR-L2 comprising the amino acid sequence of SEQ ID NO:39, and
(vi) CDR-L3 comprising the amino acid sequence of SEQ ID NO:40;

(b) an antigen binding domain capable of specific binding to Fibroblast Activation Protein (FAP) comprising a heavy chain variable region (V H FAP) comprising (i) CDR-H1 comprising the amino acid sequence of SEQ ID NO:3, (ii) CDR-H2 comprising the amino acid sequence selected from the group consisting of SEQ ID NO:4, SEQ ID NO:11 and SEQ ID NO:12, and (iii) CDR-H3 comprising the amino acid sequence of SEQ ID NO:5, and a light chain variable region (V L FAP) comprising (iv) CDR-L1 comprising the amino acid sequence selected from the group consisting of SEQ ID NO:6, SEQ ID NO:13 and SEQ ID NO:14, (v) CDR-L2 comprising the amino acid sequence of SEQ ID NO:7, and (vi) CDR-L3 comprising the amino acid sequence of SEQ ID NO:8, and
(c) a Fc region composed of a first and a second subunit capable of stable association.

2. The bispecific antigen binding molecule of claim 1 , wherein the Fc region comprises one or more amino acid substitution that reduces the binding affinity of the antibody to an Fc receptor and/or effector function.

3. The bispecific antigen binding molecule of claim 1 , wherein the antigen binding domain capable of specific binding to FAP comprises:
a heavy chain variable region (V H FAP) comprising an amino acid sequence that is at least about 90% identical to the amino acid sequence of SEQ ID NO:9, and
a light chain variable region (V L FAP) comprising an amino acid sequence that is at least about 90% identical to the amino acid sequence of SEQ ID NO:10.

4. The bispecific antigen binding molecule of claim 1 , wherein the antigen binding domain capable of specific binding to FAP comprises:
a heavy chain variable region (V H FAP) comprising an amino acid sequence selected from the group consisting of SEQ ID NO:15, SEQ ID NO:16, SEQ ID NO:17, SEQ ID NO:18, SEQ ID NO:19 and SEQ ID NO:20, and
a light chain variable region (V L FAP) comprising an amino acid sequence selected from the group consisting of SEQ ID NO:21, SEQ ID NO:22, SEQ ID NO:23, SEQ ID NO:24, SEQ ID NO:25 and SEQ ID NO:26.

5. The bispecific antigen binding molecule of claim 1 , wherein the antigen binding domain capable of specific binding to FAP comprises:
(a) a heavy chain variable region (V H FAP) comprising the amino acid sequence of SEQ ID NO:15 and a light chain variable region (V L FAP) comprising the amino acid sequence of SEQ ID NO:21, or
(b) a heavy chain variable region (V H FAP) comprising the amino acid sequence of SEQ ID NO:16 and a light chain variable region (V L FAP) comprising the amino acid sequence of SEQ ID NO:21, or
(c) a heavy chain variable region (V H FAP) comprising the amino acid sequence of SEQ ID NO:16 and a light chain variable region (V L FAP) comprising the amino acid sequence of SEQ ID NO:22, or
(d) a heavy chain variable region (V H FAP) comprising the amino acid sequence of SEQ ID NO:19 and a light chain variable region (V L FAP) comprising the amino acid sequence of SEQ ID NO:25.

6. The bispecific antigen binding molecule of claim 1 , wherein the antigen binding domain capable of specific binding to FAP comprises:
a heavy chain variable region (V H FAP) comprising the amino acid sequence of SEQ ID NO:15, and
a light chain variable region (V L FAP) comprising the amino acid sequence of SEQ ID NO:21.

7. The bispecific antigen binding molecule of claim 1 , wherein the antigen binding domain capable of specific binding to OX40 comprises a heavy chain variable region (V H OX40) comprising the amino acid sequence of SEQ ID NO:41 and a light chain variable region (V L OX40) comprising the amino acid sequence of SEQ ID NO:42.

8. The bispecific antigen binding molecule of claim 1 , wherein the Fc region is an IgG Fc region.

9. The bispecific antigen binding molecule of claim 8 , wherein the Fc region is of human IgG1 subclass with the amino acid mutations L234A, L235A and P329G, (as numbered according to the Kabat EU index.

10. The bispecific antigen binding molecule of claim 1 , wherein the bispecific antigen binding molecule comprises:
(a) at least two Fab fragments capable of specific binding to OX40 each connected to the N-terminus of one of subunits of the Fc region, and
(b) one cross-Fab fragment capable of specific binding to FAP fused to the C-terminus of one of subunits of the Fc region, and
(c) the Fc region composed of a first and a second subunit capable of stable association.

11. The bispecific antigen binding molecule of claim 10 , wherein the VH-Ckappa chain of the cross-fab fragment capable of specific binding to FAP is fused to the C-terminus of one of subunits of the Fc region.

12. The bispecific antigen binding molecule of claim 1 , consisting of:
(aa) a first Fab fragment capable of specific binding to OX40,
(ab) a second Fab fragment capable of specific binding to OX40,
(b) a cross-Fab fragment capable of specific binding to FAP fused to the C-terminus of one of subunits of the Fc region, and
(c) the Fc region composed of a first and a second subunit capable of stable association, wherein the first Fab fragment (aa) is fused at the C-terminus of the VH-CH1 chain to the N-terminus of the first subunit and the second Fab fragment (ab) is fused at the C-terminus of the VH-CH1 chain to the N-terminus of the second subunit.

13. The bispecific antigen binding molecule of claim 1 , consisting of:
(aa) a first Fab fragment capable of specific binding to OX40,
(ab) a second Fab fragment capable of specific binding to OX40,
(ac) a third Fab fragment capable of specific binding to OX40,
(b) a cross-Fab fragment capable of specific binding to FAP fused to the C-terminus of one of subunits of the Fc region, and
(c) the Fc region composed of a first and a second subunit capable of stable association, wherein the second Fab fragment (ab) is fused at the C-terminus of the VH-CH1 chain to the N-terminus of the VH-CH1 chain of the first Fab fragment (aa), which is in turn fused at its C-terminus to the N-terminus of the first subunit, and the third Fab fragment (ac) is fused at the C-terminus of the Fab heavy chain to the N-terminus of the second subunit.

14. The bispecific antigen binding molecule of claim 1 , consisting of:
(aa) a first Fab fragment capable of specific binding to OX40,
(ab) a second Fab fragment capable of specific binding to OX40,
(ac) a third Fab fragment capable of specific binding to OX40,
(ad) a fourth Fab fragment capable of specific binding to OX40,
(b) a cross-Fab fragment capable of specific binding to FAP fused to the C-terminus of one of subunits of the Fc region, and
(c) the Fc region composed of a first and a second subunit capable of stable association, wherein the second Fab fragment (ab) is fused at the C-terminus of the VH-CH1 chain to the N-terminus of the VH-CH1 chain of the first Fab fragment (aa), which is in turn fused at its C-terminus to the N-terminus of the first subunit, and the fourth Fab fragment (ad) is

Assignees

• Hoffmann La Roche

Inventors

• Amann Maria
• Bachl Juergen Peter
• Bujotzek Alexander
• Cantrill Carina
• Duerr Harald
• Faigle Janine
• Imhof-Jung Sabine
• Klein Christian
• Kraft Thomas
• Marrer-Berger Estelle
• Moessner Ekkehard
• Pousse Laurene
• Rueger Petra
• Sam Johannes
• Staack Roland
• Tuerck Dietrich
• Umana Pablo
• Zielonka Joerg

Classifications

• C07K16/32

  against translation products of oncogenes · CPC title

• C07K16/40 Primary

  against enzymes · CPC title

• C07K16/2809 Primary

  against the T-cell receptor (TcR)-CD3 complex · CPC title

• A61K45/06

  Mixtures of active ingredients without chemical characterisation, e.g. antiphlogistics and cardiaca · CPC title

• A61P35/00

  Antineoplastic agents · CPC title