Methods for terpenoid production

Patent metadata

Field	Value
Publication number	US-11680256-B2
Application number	US-201917272375-A
Country	US
Kind code	B2
Filing date	Sep 2, 2019
Priority date	Aug 31, 2018
Publication date	Jun 20, 2023
Grant date	Jun 20, 2023

Abstract

A bacterial strain comprising one or more vectors encoding a) one or more enzymes to produce one or more terpene precursors; and b) a fungal terpene synthase (FTPS). The present invention also relates to a method of producing a terpenoid comprising a) culturing the bacterial strain described herein in an expression medium; and b) isolating the terpenoid from said expression medium.

First claim

The invention claimed is:

1. A bacterial strain comprising one or more vectors encoding
a) one or more enzymes to produce one or more terpene precursors; and
b) a fungal terpene synthase (FTPS), wherein the FTPS is an Agrocybe aegerita FTPS comprising an amino acid sequence selected from the group consisting of SEQ ID NO: 1, 20, 26, 27, 28, 29, 30, 31, 32, 33 and 34.

2. The bacterial strain according to claim 1 , wherein the one or more vectors comprise one or more nucleotide sequences encoding the one or more enzymes and the FTPS, operably linked to an inducible or constitutive promoter.

3. The bacterial strain according to claim 1 , wherein the one or more enzymes to produce the one or more terpene precursors is part of a 1-deoxy-D-xylulose 5-phosphate (DXP) pathway, optionally wherein the enzyme is 1-deoxyxylulose-5-phosphate synthase (DXS), isopentenyl diphosphate isomerase (IDI) or both, optionally wherein the DXS comprises the amino acid sequence set forth in SEQ ID NO: 6.

4. The bacterial strain according to claim 3 , wherein the DXS is genetically modified, wherein the genetically modified DXS comprises an amino acid sequence comprising a mutation at one or more amino acid positions in the amino acid sequence set forth in SEQ ID NO: 6, optionally wherein the genetically modified DXS comprises the amino acid sequence set forth in SEQ ID NO: 24 or 25, optionally wherein the DXS is encoded by the nucleic acid sequence set forth in SEQ ID NO: 51 or 52.

5. The bacterial strain according to claim 1 , wherein the one or more enzymes to produce the one or more terpene precursors is expressed at an elevated level compared to a wild-type enzyme, wherein the wild-type enzyme comprises the amino acid sequence set forth in SEQ ID NO: 6, optionally wherein the one or more terpene precursors is farnesyl pyrophosphate (FPP), geranyl pyrophosphate (GPP), geranylgeranyl pyrophosphate (GGPP), or combinations thereof.

6. The bacterial strain according to claim 1 , wherein the FTPS is a monoterpene synthase or a sesquiterpene synthase, wherein the FTPS is encoded by a nucleic acid sequence selected from the group consisting of SEQ ID NO: 35, SEQ ID NO: 40, SEQ ID NO: 41, SEQ ID NO: 42, SEQ ID NO: 43, SEQ ID NO: 44, SEQ ID NO: 45, SEQ ID NO: 46, SEQ ID NO: 47, SEQ ID NO: 48, and SEQ ID NO: 71.

7. The bacterial strain according to claim 1 , wherein the FTPS comprises the amino acid sequence set forth in SEQ ID NO: 1.

8. The bacterial strain according to claim 1 , wherein the bacterial strain is Escherichia coli.

9. A method of producing a terpenoid comprising
a) culturing the bacterial strain of claim 1 in an expression medium; and, b) isolating the terpenoid from said expression medium.

10. A bacterial strain comprising one or more vectors encoding
a) one or more enzymes to produce one or more terpene precursors; and
b) a fungal terpene synthase (FTPS) comprising an amino acid sequence having at least 90% identity to an amino acid sequence selected from the group consisting of SEQ ID NO: 1, 20, 26, 27, 28, 29, 30, 31, 32, 33 and 34.

11. The bacterial strain of claim 10 , wherein the one or more vectors comprise one or more nucleotide sequences encoding the one or more enzymes and the FTPS, operably linked to an inducible or constitutive promoter.

12. The bacterial strain of claim 10 , wherein the one or more enzymes to produce the one or more terpene precursors is part of a 1-deoxy-D-xylulose 5-phosphate (DXP) pathway, optionally wherein the enzyme is 1-deoxyxylulose-5-phosphate synthase (DXS), isopentenyl diphosphate isomerase (IDI) or both, optionally wherein the DXS comprises the amino acid sequence set forth in SEQ ID NO: 6.

13. The bacterial strain of claim 12 , wherein the DXS is genetically modified, wherein the genetically modified DXS comprises an amino acid sequence comprising a mutation at one or more amino acid positions in the amino acid sequence set forth in SEQ ID NO: 6, optionally wherein the genetically modified DXS comprises the amino acid sequence set forth in SEQ ID NO: 24 or 25, optionally wherein the DXS is encoded by the nucleic acid sequence set forth in SEQ ID NO: 51 or 52.

14. The bacterial strain of claim 10 , wherein the one or more enzymes to produce the one or more terpene precursors is expressed at an elevated level compared to a wild-type enzyme, wherein the wild-type enzyme comprises the amino acid sequence set forth in SEQ ID NO: 6, optionally wherein the one or more terpene precursors is farnesyl pyrophosphate (FPP), geranyl pyrophosphate (GPP), geranylgeranyl pyrophosphate (GGPP), or combinations thereof.

15. The bacterial strain of claim 10 , wherein the FTPS is a monoterpene synthase or a sesquiterpene synthase, wherein the FTPS is encoded by a nucleic acid comprising a nucleotide sequence having at least 90% identity to a sequence selected from the group consisting of SEQ ID NO: 35, SEQ ID NO: 40, SEQ ID NO: 41, SEQ ID NO: 42, SEQ ID NO: 43, SEQ ID NO: 44, SEQ ID NO: 45, SEQ ID NO: 46, SEQ ID NO: 47, SEQ ID NO: 48, and SEQ ID NO: 71.

16. The bacterial strain of claim 10 , wherein the bacterial strain is Escherichia coli.

17. The bacterial strain of claim 10 , wherein the FTPS comprises an amino acid sequence having at least 95% identity to an amino acid sequence selected from the group consisting of SEQ ID NO: 1, 20, 26, 27, 28, 29, 30, 31, 32, 33 and 34.

18. A method of producing a terpenoid comprising
a) culturing the bacterial strain of claim 10 in an expression medium; and
b) isolating the terpenoid from said expression medium.

19. A genetically engineered 1-deoxyxylulose-5-phosphate synthase (DXS), wherein the genetically engineered DXS comprises an amino acid sequence comprising mutations E210D, Q459L and L415T in the amino acid sequence set forth in SEQ ID NO: 6, optionally wherein the genetically engineered DXS further comprises a mutation H105T.

20. The genetically engineered DXS according to claim 19 , comprising the amino acid sequence set forth in SEQ ID NO: 25.

Assignees

• Agency Science Tech & Res
• Univ Justus Liebig Giessen

Inventors

• Zhang Congqiang
• Chen Xixian
• Martin Ruehl
• Too Heng-Phon

Classifications

• C12N9/90

  Isomerases (5.) · CPC title

• C12P5/002

  cyclic (compounds containing at least three condensed carbocyclic rings C12P15/00) · CPC title

• C12N9/88 Primary

  Lyases (4.) · CPC title

• C12Y503/03002

  Isopentenyl-diphosphate DELTA-isomerase (5.3.3.2) · CPC title

• C12N9/1022

  transferring aldehyde or ketonic groups (2.2) · CPC title