Fluorescence scanning microscope and method for imaging a sample

Patent metadata

Field	Value
Publication number	US-11650158-B2
Application number	US-202017603594-A
Country	US
Kind code	B2
Filing date	Apr 17, 2020
Priority date	Apr 17, 2019
Publication date	May 16, 2023
Grant date	May 16, 2023

Abstract

A fluorescence scanning microscope includes excitation and de-excitation light sources, which are designed to generate an excitation and a de-excitation light distribution, respectively. An illumination unit combines the light distributions to form a light distribution scanning over multiple illumination target points of a sample in such a way that an intensity maximum of the excitation light distribution and an intensity minimum of the de-excitation light distribution are spatially superimposed on one another. A detector detects fluorescence photons emitted from the respective illumination target point as a function of their arrival times. A processor evaluates the fluorescence photons with respect to the arrival times, generates a first pixel and a second pixel based thereon, assembles the first and second pixels to form first and second sample images, respectively, and, by means of the two sample images, determines a spatial offset between the intensity maximum and the intensity minimum.

First claim

The invention claimed is:

1. A fluorescence scanning microscope, comprising:
an excitation light source, which is configured to generate an excitation light distribution, which excites fluorophores present in a sample to a spontaneous emission of fluorescence photons,
a de-excitation light source, which is configured to generate a de-excitation light distribution, which de-excites the fluorophores excited by the excitation light distribution in the sample in a course of a stimulated emission of fluorescence photons, wherein the excitation light source and the de-excitation light source are pulsed or modulated laser light sources,
delay circuitry, which is configured to match the de-excitation light source with the excitation light source with respect to time in such a way that the light pulse or the light modulation of the de-excitation light source has a predetermined delay at a position of the respective illumination target point in relation to the light pulse or the light modulation of the excitation light source,
an illumination apparatus, which is configured to combine the excitation light distribution and the de-excitation light distribution to form a light distribution scanning over multiple illumination target points of the sample in such a way that an intensity maximum of the excitation light distribution and an intensity minimum of the de-excitation light distribution are spatially superimposed on one another in the respective illumination target point,
a detector, which is configured to detect the fluorescence photons emitted from the respective illumination target point as a function of arrival times of the fluorescence photons, and
a processor, which is configured to:
evaluate the fluorescence photons detected in the respective illumination target point with respect to the arrival times, generate first pixel characteristics and second pixel characteristics based on the evaluation, which represent the respective illumination target point,
assemble the first pixel characteristics to form a first sample image and the second pixel characteristics to form a second sample image, and
based on the two sample images, determine a spatial offset between the intensity maximum of the excitation light distribution and the intensity minimum of the de-excitation light distribution.

2. The fluorescence scanning microscope as claimed in claim 1 , wherein the detector is configured to detect the fluorescence photons emitted from the respective illumination target point by time-correlated single photon counting as a function of the arrival times.

3. The fluorescence scanning microscope as claimed in claim 1 , further comprising an adjustment element, which is controllable by the processor to influence the excitation light distribution and/or the de-excitation light distribution to compensate for the spatial offset.

4. The fluorescence scanning microscope as claimed in claim 3 , wherein the adjustment element is controllable by the processor to influence the excitation light distribution and/or the de-excitation light distribution to compensate for the spatial offset for various regions of an image field individually.

5. The fluorescence scanning microscope as claimed in claim 3 , wherein the adjustment element is a light deflection element adjustably arranged in the beam path of the de-excitation light distribution or in the beam path of the excitation light distribution.

6. The fluorescence scanning microscope as claimed in claim 1 , wherein the detector is configured to detect the arrival times of the fluorescence photons in relation to a starting time, which is defined by the light pulse or the light modulation of the excitation light source.

7. The fluorescence scanning microscope as claimed in claim 6 , wherein the processor is configured to evaluate the fluorescence photons detected in the respective illumination target point by comparing the arrival times to a predetermined threshold value and assigning the fluorescence photons that have arrival times which are less than or equal to the predetermined threshold value to the first pixel characteristics and assigning the fluorescence photons that have arrival times which are greater than the predetermined threshold value to the second pixel characteristics.

8. The fluorescence scanning microscope as claimed in claim 7 , wherein the threshold value corresponds to a delay which the light pulse or the light modulation of the de-excitation light source has at the position of the respective illumination target point in relation to the light pulse or the light modulation of the excitation light source.

9. The fluorescence scanning microscope as claimed in claim 6 , wherein the processor is configured to evaluate the fluorescence photons acquired in the respective illumination target point by fitting a model function which includes a first fit parameter and a second fit parameter to a time distribution of the fluorescence photons given by the detected arrival times so as to ascertain the first fit parameter and the second fit parameter, and wherein the processor is configured to generate the first pixel characteristics based on the first fit parameter and the second pixel characteristics based on the second fit parameter.

10. The fluorescence scanning microscope as claimed in claim 8 , wherein the model function is given by the following function m(t):
m ( t )= a 0*exp(− t/t 0)+ a 1*exp(− t/t 1)  (1)

where:
t is the arrival time of the respective fluorescence photon,
t 0 is a mean lifetime of the fluorophores upon absence of the de-excitation light distribution,
t 1 is a mean lifetime of the fluorophores upon presence of the de-excitation light distribution,
a 0 is the first fit parameter, and
a 1 is the second fit parameter.

11. The fluorescence scanning microscope as claimed in claim 6 , wherein the excitation light source is the pulsed or modulated laser light source which defines the starting time.

12. The fluorescence scanning microscope as claimed in claim 1 , wherein a pulse length of the de-excitation light source is greater than a pulse length of the excitation light source, and/or wherein the pulse length of the de-excitation light source is in a range of a mean lifetime of an excited state of the fluorophores from 0.1 to 6.0 ns.

13. The fluorescence scanning microscope as claimed in claim 1 , wherein the processor is configured to determine a further mismatch of the de-excitation light distribution based on the two sample images in addition to the spatial offset.

14. The fluorescence scanning microscope as claimed claim 1 , wherein the intensity minimum of the de-excitation light distribution is an intensity zero point.

15. The fluorescence scanning microscope as claimed in claim 1 , wherein the processor is configured to determine the spatial offset by bringing the two sample images into a relationship with one another via a cross-correlation.

16. A method for imaging a sample using a fluorescence scanning microscope, the method comprising:
generating, using an excitation light source, an excitation light distribution, which excites fluorophores present in the sample to a spontaneous emission of fluorescence photons,
matching, using delay circuitry, a de-excitation light source with the excitation light source with respect to time in such a way that a light pulse or a light modulation of the de-excitation light source has a predetermined delay at one or more positions in relation to a light pulse or a light modulation of the excitation light source,
generating, using the de-excitation light source, a de-excitation light distri

Assignees

• Leica Microsystems

Inventors

• Foelling Jonas
• Friedrich Lars

Classifications

• G01N21/6458 Primary

  Fluorescence microscopy (fluorescence microscopes per se G02B21/0076 and G02B21/16) · CPC title

• G02B27/58

  Optics for apodization or superresolution; Optical synthetic aperture systems · CPC title

• G02B21/0084

  time-scale detection, e.g. strobed, ultra-fast, heterodyne detection · CPC title

• G01N21/6408

  with measurement of decay time, time resolved fluorescence · CPC title

• G02B21/0064 Primary

  multi-spectral or wavelength-selective arrangements, e.g. wavelength fan-out, chromatic profiling (G02B21/0076 takes precedence) · CPC title