Specific substrate of an ALDH isoenzyme

Patent metadata

Field	Value
Publication number	US-11519014-B2
Application number	US-201716320071-A
Country	US
Kind code	B2
Filing date	Jul 27, 2017
Priority date	Jul 28, 2016
Publication date	Dec 6, 2022
Grant date	Dec 6, 2022

Abstract

The invention relates to a specific substrate on an ALDH isoenzyme, to a composition comprising at least one such substrate, to a diagnostic marker comprising such a substrate, and to the uses thereof and associated methods.

First claim

The invention claimed is:

1. A method for quantifying at least one aldehyde dehydrogenase (ALDH) isoenzyme expressed by a cell population, comprising:
(i) bringing the ALDH isoenzyme expressed by a cell population into contact with at least one specific substrate of an ALDH isoenzyme comprising a compound:
(a) of formula (I): R—COO-A (I) resulting from the esterification of a fluorescent tracer A-OH with an acylating agent derived from the corresponding acid RCOOH, in which R is chosen in order to form a compound selected from the group consisting of retinoate, propionate, octanoate, benzoate, 4-aminobutyrate, hexanoate, 4-diethylaminobenzoate and 4-hydroxy-2-nonenoate; or
(b) of formula (II):

in which:
R and R′, which are identical or different, are chosen in order to form a compound selected from the group consisting of retinoate, propionate, octanoate, benzoate, 4-aminobutyrate, hexanoate, 4-diethylaminobenzoate and 4-hydroxy-2-nonenoate; and
(ii) measuring the fluorescence of the fluorescent tracer released by the reaction between the ALDH isoenzyme and the at least one specific substrate.

2. A method for distinguishing healthy stem cells from cancer stem cells, the method comprising:
(i) bringing an ALDH isoenzyme expressed by a cell population into contact with at least one specific substrate of an ALDH isoenzyme comprising a compound:
(a) of formula (I): R—COO-A (I) resulting from the esterification of a fluorescent tracer A-OH with an acylating agent derived from the corresponding acid RCOOH, in which R is chosen in order to form a compound selected from the group consisting of retinoate, propionate, octanoate, benzoate, 4-aminobutyrate, hexanoate, 4-diethylaminobenzoate and 4-hydroxy-2-nonenoate; or
(b) of formula (II):

in which:
R and R′, which are identical or different, are chosen in order to form a compound selected from the group consisting of retinoate, propionate, octanoate, benzoate, 4-aminobutyrate, hexanoate, 4-diethylaminobenzoate and 4-hydroxy-2-nonenoate;
(ii) measuring the fluorescence of the fluorescent tracer released by the reaction between the ALDH isoenzyme and the at least one specific substrate; and
(iii) analyzing the fluorescence of the fluorescent tracer to determine the relative activity of the ALDH isoenzyme expressed by the cell population.

3. The method according to claim 2 , wherein the method distinguishes healthy stem cells from stem cells from solid cancers and/or hematological malignant tumors.

4. A method for distinguishing cells expressing at least one ALDH isoenzyme in a cell population, wherein the method comprises:
(i) measuring the fluorescence of a cell population that expresses an ALDH isoenzyme to obtain a first fluorescence;
(ii) bringing the cell population that expresses an ALDH isoenzyme into contact with at least one specific substrate of an ALDH isoenzyme comprising a compound:
(a) of formula (I): R—COO-A (I) resulting from the esterification of a fluorescent tracer A-OH with an acylating agent derived from the corresponding acid RCOOH, in which R is chosen in order to form a compound selected from the group consisting of retinoate, propionate, octanoate, benzoate, 4-aminobutyrate, hexanoate, 4-diethylaminobenzoate and 4-hydroxy-2-nonenoate; or
(b) of formula (II):

in which:
R and R′, which are identical or different, are chosen in order to form a compound selected from the group consisting of retinoate, propionate, octanoate, benzoate, 4-aminobutyrate, hexanoate, 4-diethylaminobenzoate and 4-hydroxy-2-nonenoate;
(iii) measuring the fluorescence of the cell population that expresses an ALDH isoenzyme that has been brought into contact with the at least one specific substrate to obtain a second fluorescence; and
(iv) comparing the first fluorescence and the second fluorescence to identify cells with increased fluorescence relative to the fluorescence of the cell population that expresses an ALDH isoenzyme before the cell population that expresses an ALDH isoenzyme is brought into contact with the at least one specific substrate of an ALDH isoenzyme.

5. The method according to claim 1 , wherein A-OH is chosen from the group consisting of 7-hydroxycoumarin, a fluorophore of the tokyo green family, resorufin and fluorescein.

6. The method according to claim 1 , wherein the ALDH isoenzyme is ALDH1 and wherein R and R′, which are identical or different, are chosen in order to form a compound selected from the group consisting of retinoate, hexanoate and propionate.

7. The method according to claim 1 , wherein the ALDH isoenzyme is ALDH3 and wherein R and R′, which are identical or different, are chosen in order to form a compound selected from the group consisting of octanoate, the 4-hydroxy-2-nonenoate, the 4-diethylaminobenzoate and benzoate.

Assignees

• Advanced Biodesign
• Centre Nat Rech Scient
• Univ Claude Bernard Lyon
• Quash Jean Yves

Inventors

• Ceylan Ismail
• Martin Guillaume
• QUASH GéRARD
• Perez-Alea Milleidys
• Fournet Guy

Classifications

• C12Q2334/20

  Coumarin derivatives · CPC title

• C12Q1/007 Primary

  involving isoenzyme profiles (for detection of an individual isoenzyme C12Q1/25 - C12Q1/66) · CPC title

• C12Q1/32

  involving dehydrogenase · CPC title

• C12Q2334/40

  Triphenylmethane dye chromogens, e.g. fluorescein derivatives · CPC title