Successive sampling device and associated method

Patent metadata

Field	Value
Publication number	US-11275084-B2
Application number	US-68819310-A
Country	US
Kind code	B2
Filing date	Jan 15, 2010
Priority date	Jan 15, 2010
Publication date	Mar 15, 2022
Grant date	Mar 15, 2022

Abstract

A method of determining a number of a solution constituent includes introducing a first number of solution constituents to a first test location, establishing a first binding environment for the introduced first number of solution constituents, creating a first residual number of solution constituents by binding a first plurality of solution constituents, establishing a second binding environment for the first residual number of solution constituents, creating a second residual number of solution constituents by binding a second plurality of solution constituents from the first residual number of solution constituents, obtaining a first signal associated with the bound first plurality of solution constituents, obtaining a second signal associated with the bound second plurality of solution constituents, and determining a second number of a constituent of interest based upon the obtained first signal and the obtained second signal.

First claim

The invention claimed is:

1. A method of determining a number of a solution constituent comprising:
determining a first percentage of a first solution constituent of interest that will be bound at a first affinity assay test location based upon a first affinity constant associated with the first affinity assay test location and a probe density of the first affinity assay test location;
determining a second percentage of a second solution constituent that will be bound at the first affinity assay test location based upon a second affinity constant associated with the first affinity assay test location and the probe density of the first affinity assay test location;
introducing a first number of solution constituents to the first affinity assay test location;
creating a first residual number of solution constituents by binding with a plurality of identical probe molecules a first plurality of solution constituents at the first affinity assay test location wherein the first plurality of solution constituents includes a first portion of the first solution constituent of interest and a first portion of the second solution constituent;
creating a second residual number of solution constituents by binding a second plurality of solution constituents from the first residual number of solution constituents wherein the second plurality of solution constituents includes a second portion of the first solution constituent of interest and a second portion of the second solution constituent;
obtaining a first signal associated with the bound first plurality of solution constituents;
obtaining a second signal associated with the bound second plurality of solution constituents; and
determining a second number of the first solution constituent of interest based upon the determined first percentage, the determined second percentage, the obtained first signal and the obtained second signal, wherein the obtained first signal and the obtained second signal are used to compensate for the second solution constituent.

2. The method of claim 1 , further comprising:
transporting the first residual number of solution constituents from the first affinity assay test site to a second affinity assay test site.

3. The method of claim 2 , wherein transporting the first residual number of solution constituents comprises:
transporting a plurality of analytes bound to a respective plurality of capture probes from the first affinity assay test site to a second affinity assay test site.

4. The method of claim 3 , further comprising:
releasing the transported plurality of bound analytes from the respective plurality of capture probes.

5. The method of claim 4 , wherein releasing the transported plurality of bound analytes comprises:
releasing the transported plurality of bound analytes by modifying the temperature of the transported plurality of bound analytes.

6. The method of claim 4 , wherein releasing the transported plurality of bound analytes comprises:
releasing the transported plurality of bound analytes by exposing the transported plurality of bound analytes to a dehybridation solution.

7. The method of claim 2 , wherein transporting the first residual number of solution constituents comprises:
transporting the first residual number of solution constituents using a microfluidics technology.

8. The method of claim 2 , wherein transporting the first residual number of solution constituents comprises:
transporting the first residual number of solution constituents using a capillary flow.

9. The method of claim 2 , wherein transporting the first residual number of solution constituents comprises:
transporting the first residual number of solution constituents using magnetic beads.

10. The method of claim 2 , wherein transporting the first residual number of solution constituents comprises:
transporting the first residual number of solution constituents by modifying an electrical charge acting upon the first residual number of solution constituents.

11. The method of claim 1 , wherein the first plurality of solution constituents includes a first portion of a third solution constituent and the second plurality of solution constituents includes a second portion of the third solution constituent, the method further comprising:
creating a third residual number of solution constituents by binding a third plurality of solution constituents from the second residual number of solution constituents wherein the third plurality of solution constituents includes a third portion of the first solution constituent of interest, a third portion of the second solution constituent, and a third portion of the third solution constituent;
obtaining a third signal associated with the bound third plurality of solution constituents; and
determining a third number of the second solution constituent based upon the obtained first signal, the obtained second signal, and the obtained third signal.

12. The method of claim 1 , wherein the second residual is created at a second affinity assay test location, and determining a second number of the first solution constituent of interest comprises determining the second number based upon the following equations:
S 1 =a 1-1 n 1-1 +a 1-2 n 1-2 + . . . a 1-x n 1-x
S 2 =a 2-1 n 2-1 +a 2-2 n 2-2 + . . . a 2-x n 2-x

wherein
“S 1 ” is the first signal,
“S 2 ” is the second signal,
“a 1-1 ” is a known percentage (a) of a solution constituent (1 through x) which binds at the first affinity assay test location such that a 1-1 is the first percentage and a 1-2 is the second percentage,
“n 1-1 ” is a number (n) of the solution constituent (1 through x) at the first affinity assay test location,
“a 2-1 ” is a known percentage (a) of a solution constituent (1 through x) which binds at the second affinity assay test location, and
“n 2-1 ” is a number (n) of the solution constituent (1 through x) at the second affinity assay test location.

13. A method of determining a number of a solution constituent comprising:
determining a first percentage of a first solution constituent of interest that will be bound at a first affinity assay test location based upon a first affinity constant associated with the first affinity assay test location and a probe density of the first affinity assay test location;
determining a second percentage of a second solution constituent that will be bound at the first affinity assay test location based upon a second affinity constant associated with the first affinity assay test location and the probe density of the first affinity assay test location;
determining a third percentage of the first solution constituent of interest that will be bound at a second affinity assay test location based upon a third affinity constant associated with the second affinity assay test location and a probe density of the second affinity assay test location;
determining a fourth percentage of the second solution constituent that will be bound at the second affinity assay test location based upon a fourth affinity constant associated with the second affinity assay test location and the probe density of the second affinity assay test location;
providing the first affinity assay test location and the second affinity assay test location with identical probe molecules;
introducing a first number of first and second solution constituents to the first affinity assay test location;
creating a first residual number of first and second solution constituents by binding a first plurality of first and second solution constituents at the first affinity assay test location wherein

Assignees

• Kavusi Sam
• Roser Daniel
• Lang Christoph
• Talasaz Amirali Haj Hossein
• Univ Stanford
• Bosch Gmbh Robert

Inventors

• Kavusi Sam
• Roser Daniel
• Lang Christoph
• Talasaz Amirali Haj Hossein

Classifications

• G01N33/54366 Primary

  Apparatus specially adapted for solid-phase testing · CPC title

• B01L3/5027

  by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip · CPC title

• G01N33/54393

  Improving reaction conditions or stability, e.g. by coating or irradiation of surface, by reduction of non-specific binding, by promotion of specific binding · CPC title

• C12Q1/6816

  characterised by the detection means (C12Q1/6804 takes precedence) · CPC title

• C12Q2565/501

  being an array of oligonucleotides · CPC title