Multivalent ligand for myotonic dystrophy

Patent metadata

Field	Value
Publication number	US-11242326-B2
Application number	US-201816641450-A
Country	US
Kind code	B2
Filing date	Aug 23, 2018
Priority date	Aug 25, 2017
Publication date	Feb 8, 2022
Grant date	Feb 8, 2022

Abstract

Abnormally long r(CUG)n repeat expansion is believed to be the major cause of Myotonic dystrophy type 1 (DM1) because it binds to muscleblind-like 1 (MBNL 1) protein which regulates RNA splicing, leading to the mis-splicing of more than 100 pre-mRNAs. The rational design of oligomers with alternating bisamidine and melamine structure resulted in good binding affinity to the RNA target because of a multivalent effect. The oligomers also showed excellent activity in disrupting nuclear foci, reversing the mis-splicing of IR minigene, and sabotaging the toxic RNA biosynthesis. Excellent activity in Drosophila based DM1 models was also observed for the oligomers, rescuing the climbing ability of the flies upon oral treatment.

First claim

What is claimed is:

1. A multivalent ligand represented by Formula I:

or a salt thereof;
wherein
Q is —(CHR) n G 1 wherein n is 2-5, G 1 is

J is —(CHR) n -G 2 wherein n is 2-5;
G 2 is OR, NR 2 , or

wherein X is O or NR, and Y is OR or NR 2 ;
Z is OR, NR 2 , or

wherein X is O or NR, and Y is OR or NR 2 ;
each R is independently H or branched or unbranched —(C 1 -C 6 )alkyl; m is 2-8; and n of Formula I is 2-20.

2. The multivalent ligand of claim 1 wherein R is H.

3. The multivalent ligand of claim 1 wherein m is 4.

4. The multivalent ligand of claim 1 wherein the molecular weight of the multivalent ligand is about 0.5 kDa to about 10 kDa, and the multivalent ligand is cell permeable.

5. The multivalent ligand of claim 1 wherein the multivalent ligand selectively binds to rCUG(exp).

6. The multivalent ligand of claim 5 wherein the multivalent ligand has a binding affinity (Ki) of about 1 nanomolar to about 10 micromolar.

7. The multivalent ligand of claim 1 wherein the multivalent ligand inhibits transcription of CTG(exp).

8. A pharmaceutical composition comprising the multivalent ligand according to claim 1 in combination with a pharmaceutically acceptable diluent, carrier, excipient, or buffer.

9. A method of relieving a sequestered muscleblind-like 1 (MBNL1) protein, comprising contacting a sequestered MBNL1 protein with a multivalent ligand according to claim 1 , thereby relieving the sequestered MBNL1 protein, wherein the sequestered MBNL1 protein is sequestered by rCUG(exp).

10. The method of claim 9 wherein the multivalent ligand selectively binds to one or more CUG moieties of rCUG(exp).

11. The method of claim 9 wherein contacting a sequestered MBNL1 protein with a multivalent ligand is in a cell afflicted with myotonic dystrophy type 1 (DM1), and the area of a focal inclusion in the nucleus of the cell is reduced compared to the area of a focal inclusion in the nucleus of a second cell afflicted with DM1, when a sequestered MBNL1 protein is not in contact with the multivalent ligand in the second cell.

12. A method of reducing the symptoms of myotonic dystrophy type 1 (DM1) comprising administering to a subject having DM1 an effective amount of a multivalent ligand according to claim 1 , thereby reducing the symptoms of DM1.

13. The method of claim 12 wherein the symptoms of DM1 reduced by the administration are one or more of myopathy, myotonia, progressive muscle atrophy, cataracts, cardiac defect, and insulin dependent diabetes.

14. The method of claim 12 wherein the effective amount is a concentration of about 0.1 micromolar to about 10 micromolar.

15. A method of preparing a multivalent ligand according to claim 1 comprising:
a) contacting a mixture of a dialkyl terephthalimidate and an (aminoalkyl)triaminotriazine to form a product; and
b) acidifying the product;

wherein the acidified product provides the multivalent ligand according to claim 1 .

16. The method of claim 15 further comprising dialyzing the acidified product to form a purified product.

17. The multivalent ligand of claim 1 wherein the multivalent ligand is represented by Formula II, III, or IV

wherein
R is H or ethyl;
n is 2-20; and
A is Cl − , BP − , I − , TFA − , HSO 4 − , AcO − , HCO 3 − , TsO − , MsO − , or PhSO 3 − .

18. The multivalent ligand of claim 17 wherein n is about 4-8.

Assignees

• Univ Illinois

Inventors

• Bai Yugang
• Zimmerman Steven C
• Kalsotra Auinash

Classifications

• C07D251/26 Primary

  with only hetero atoms directly attached to ring carbon atoms · CPC title

• A61K9/06

  Ointments; Bases therefor; {Other semi-solid forms, e.g. creams, sticks, gels (composition of ointments, creams or gels A61K47/00)} · CPC title

• A61K9/0019

  Injectable compositions; Intramuscular, intravenous, arterial, subcutaneous administration; Compositions to be administered through the skin in an invasive manner (non-active ingredients are additionally classified in A61K47/00) · CPC title

• A61K9/4858

  Organic compounds · CPC title

• A61K9/2054

  Cellulose; Cellulose derivatives, e.g. hydroxypropyl methylcellulose · CPC title