Cyclophanes for live-cell imaging
US-11904025-B2 · Feb 20, 2024 · US
US11241507B2 · US · B2
| Field | Value |
|---|---|
| Publication number | US-11241507-B2 |
| Application number | US-201816616336-A |
| Country | US |
| Kind code | B2 |
| Filing date | May 23, 2018 |
| Priority date | May 24, 2017 |
| Publication date | Feb 8, 2022 |
| Grant date | Feb 8, 2022 |
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The present invention provides turn-ON dioxetane-based chemiluminescence probes based on the Schapp's adamantylidene-dioxetane probe, which emit light in the near-infrared (NIR) region and are therefore useful for in vivo imaging, as well as compositions and uses thereof.
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What is claimed is: 1. A compound of the formula Ia or Ib: wherein R 1 is selected from the group consisting of a linear or branched (C 1 -C 18 )alkyl, and (C 3 -C 7 )cycloalkyl; R 2 and R 3 each independently is selected from the group consisting of a branched (C 3 -C 18 )alkyl and (C 3 -C 7 )cycloalkyl, or R 2 and R 3 together with the carbon atom to which they are attached form a fused, spiro or bridged cyclic or polycyclic ring, R 4 is H, or a caging group; L is absent or is a linker of the formula L1, L2 or L3, optionally substituted at the aromatic ring with one or more substituents each independently selected from the group consisting of (C 1 -C 18 )alkyl and (C 3 -C 7 )cycloalkyl, wherein M is absent or is —O— or —NH—, and the asterisk represents the point of attachment to the group Y, provided that M is —O— or —NH— unless R 4 is 4,4,5,5-tetramethyl-1,3,2-dioxaborolanyl or —B(OH) 2 , and when R 4 is H, L is absent; Y is absent or is —O—, provided that Y is —O— unless R 4 is 4,4,5,5-tetramethyl-1,3,2-dioxaborolanyl or —B(OH) 2 , and L is absent; R 5 is H, or represents at least one electron acceptor group such as halogen, —NO 2 , —CN, —COOR 6 , —C(═O)R 6 and —SO 2 R 6 , each independently attached either ortho or para to the —Y-L-R 4 group; R 6 each independently is H or —(C 1 -C 18 )alkyl; and A represents one or two π* acceptor groups, each independently attached either ortho or para to the —Y-L-R 4 group and selected from the group consisting of —CN and —CH═CH-E, wherein E is (a) —CN, —COOH, or —COO(C 1 -C 18 )alkyl optionally interrupted in the alkylene chain with one or more —O— groups; (b) 4-pyridinyl, methylpyridinium-4-yl, 3,3-dimethyl-3H-indolyl, or 1,3,3-trimethyl-3H-indol-1-ium-2-yl, optionally substituted at one or more of the carbon atoms of the aromatic or heteroaromatic ring with a substituent each independently selected from the group consisting of halogen, —CN, —COOH, —COOR, and —C(O)R, wherein R is —(C 1 -C 18 )alkyl; (c) 4-(dicyanomethylene)-4H-chromen-2-yl, 4H-chromen-2-yl-4-one, 9-(dicyanomethylene)-9H-xanthen-3-yl, 9H-xanthen-3-yl-9-one, 2-dicyanomethylenemethyl-thieno[3,2-b]thiophene-5-yl, 3-methylbenzo[d]thiazol-2-yl-3-ium, tetrathiafulvalenyl, 1,2,3,5,6,7-hexahydropyrido[3,2,1-ij]quinolin-9-yl, benzo[d]oxazol-2-yl, benzo[d]thiazol-2-yl, 1H-benzo[d]imidazol-2-yl, 2,6-di-tert-butylpyrylium-4-yl, 1-methylquinolin-1-ium-4-yl, or 4-dicyanomethylene-2-methyl-4H-pyran-6-yl, optionally substituted at one or more of the carbon atoms of the aromatic or heteroaromatic ring with a substituent each independently selected from the group consisting of halogen, —CN, —COOH, —COOR, and —C(O)R, wherein R is —(C 1 -C 18 )alkyl; or (d) 5,5-dimethyl-3-cyano-2-dicyanomethylene-2,5-dihydrofuran-4-yl, or 5,5-dimethyl-3-cyano-2-oxo-2,5-dihydrofuran-4-yl, provided that at least one of said π* acceptor groups is —CH═CH-E, wherein E is selected from groups (c) and (d). 2. The compound of claim 1 , wherein: (i) R 1 is a linear or branched (C 1 -C 8 )alkyl; or (ii) R 2 and R 3 together with the carbon atom to which they are attached form a fused, spiro or bridged polycyclic ring; or (iii) said caging group is selected from the group consisting of: wherein Pep is a group comprising a peptide moiety consisting of at least two amino acid residues and linked to the aniline group via a carboxylic group of said peptide moiety; or (iv) R 5 is H, or an electron acceptor group selected from the group consisting of halogen and —CN, attached either ortho or para to the —Y-L-R 4 group. 3. The compound of claim 2 , wherein R 2 and R 3 together with the carbon atom to which they are attached form adamantyl. 4. The compound of claim 2 , wherein R 5 is halogen or —CN, attached ortho to the —Y-L-R 4 group. 5. The compound of claim 1 , wherein A represents one or two π* acceptor groups, wherein: (i) one of said π* acceptor groups is of the formula —CH═CH-E, wherein E is (a) 4-(dicyanomethylene)-4H-chromen-2-yl, 4H-chromen-2-yl-4-one, 9-(dicyanomethylene)-9H-xanthen-3-yl, 9H-xanthen-3-yl-9-one, 2-dicyanomethylenemethyl-thieno[3,2-b]thiophene-5-yl, 3-methylbenzo[d]thiazol-2-yl-3-ium, tetrathiafulvalenyl, 1,2,3,5,6,7-hexahydropyrido[3,2,1-ij]quinolin-9-yl, benzo[d]oxazol-2-yl, benzo[d]thiazol-2-yl, 1H-benzo[d]imidazol-2-yl, 2,6-di-tert-butylpyrylium-4-yl, 1-methylquinolin-1-ium-4-yl, or 4-dicyanomethylene-2-methyl-4H-pyran-6-yl, optionally substituted at one or more of the carbon atoms of the aromatic or heteroaromatic ring; or (b) 5,5-dimethyl-3-cyano-2-dicyanomethylene-2,5-dihydrofuran-4-yl, or 5,5-dimethyl-3-cyano-2-oxo-2,5-dihydrofuran-4-yl; and (ii) the other one of said π* acceptor groups, when present, is of the formula —CH═CH-E, wherein E is —CN, —COOH, or —COO(C 1 -C 18 )alkyl optionally interrupted in the alkylene chain with one or more —O— groups. 6. The compound of claim 5 , wherein: (i) one of said π* acceptor groups is of the formula —CH═CH-E, wherein E is 4-(dicyanomethylene)-4H-chromen-2-yl optionally substituted at one or more of the carbon atoms of the aromatic or heteroaromatic ring, or 5,5-dimethyl-3-cyano-2-dicyanomethylene-2,5-dihydrofuran-4-yl; and (ii) the other one of said π* acceptor groups, when present, is of the formula —CH═CH-E, wherein E is —CN, —COOH, or —COO(C 1 -C 18 )alkyl optionally interrupted in the alkylene chain with one or more —O— groups. 7. The compound of claim 1 , wherein: R 1 is a linear or branched (C 1 -C 8 )alkyl; R 2 and R 3 together with the carbon atom to which they are attached form a fused, spiro or bridged polycyclic ring; R 5 is H, or an electron acceptor group selected from the group consisting of halogen and —CN, attached either ortho or para to the —Y-L-R 4 group; and A represents one or two π* acceptor groups, wherein (i) one of said π* acceptor groups is of the formula —CH═CH-E, wherein E is (a) 4-(dicyanomethylene)-4H-chromen-2-yl, 4H-chromen-2-yl-4-one, 9-(dicyanomethylene)-9H-xanthen-3-yl, 9H-xanthen-3-yl-9-one, 2-dicyanomethylenemethyl-thieno[3,2-b]thiophene-5-yl, 3-methylbenzo[d]thiazol-2-yl-3-ium, tetrathiafulvalenyl, 1,2,3,5,6,7-hexahydropyrido[3,2,1-ij]quinolin-9-yl, benzo[d]oxazol-2-yl, benzo[d]thiazol-2-yl, 1H-benzo[d]imidazol-2-yl, 2,6-di-tert-butylpyrylium-4-yl, 1-methylquinolin-1-ium-4-yl, or 4-dicyanomethylene-2-methyl-4H-pyran-6-yl, optionally substituted at one or more of the carbon atoms of the aromatic or heteroaromatic ring; or (b) 5,5-dimethyl-3-cyano-2-dicyanomethylene-2,5-dihydrofuran-4-yl, or 5,5-dimethyl-3-cyano-2-oxo-2,5-dihydrofuran-4-yl; and (ii) the other one of said π* acceptor groups, when present, is of the formula —CH═CH-E, wherein E is —CN, —COOH, or —COO(C 1 -C 18 )alkyl optionally interrupted in the alkylene chain with one or more —O— groups. 8. The compound of claim 7 , wherein: R 1 is methyl, ethyl, or isopropyl; R 2 and R 3 together with the carbon atom to which they are attached form adamantyl; R 5 is H, or is an electron acceptor group selected from the group consisting of halogen and —CN, attached ortho to the —Y-L-R 4 group; and A represents one or two π* acceptor groups, wherein one of said π* acceptor groups is of the formula —CH═CH-E, wherein E is 4-(dicyanomethylene)-4H-chromen-2-yl, or 5,5-dimethyl-3-cyano-2-dicyanomethylene-2,5-dihydrofuran-4-yl; and the other one of said π* acceptor groups, when p
the ethylene chain carrying an heterocyclic residue, e.g. heterocycle-CH=CH-C6H5 · CPC title
containing —CHO groups · CPC title
linked by a carbon chain containing aromatic rings · CPC title
containing organic luminescent materials · CPC title
the fluorescent group being a small organic molecule · CPC title
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