ALK7:actriib heteromultimers and uses thereof

Patent metadata

Field	Value
Publication number	US-11028145-B2
Application number	US-201916251935-A
Country	US
Kind code	B2
Filing date	Jan 18, 2019
Priority date	Apr 6, 2015
Publication date	Jun 8, 2021
Grant date	Jun 8, 2021

Abstract

In certain aspects, the disclosure provides soluble heteromeric polypeptide complexes comprising an extracellular domain of an ALK7 receptor and an extracellular domain of ActRIIB In certain aspects, these ALK7:ActRIIB heteromultimers are can be used to improve metabolic parameters in a patient in need thereof. In certain aspects, these ALK7:ActRIIB heteromultimers are can be used to treat or prevent one or more kidney-associated disease or condition in a patient in need thereof.

First claim

We claim:

1. A method of treating a kidney disorder in a subject in need thereof, comprising administering to the subject a soluble recombinant heteromultimer comprising:
(i) an ALK7 polypeptide comprising an amino acid sequence that is at least 90% identical to amino acids 28-92 of SEQ ID NO: 9, and
(ii) an ActRIIB polypeptide comprising an amino acid sequence that is at least 90% identical to amino acids 29-109 of SEQ ID NO: 1, and
wherein the heteromultimer binds to one or more of: activin B, activin C, and activin AC; and
wherein the kidney disorder is selected from a group consisting of kidney fibrosis and kidney inflammation.

2. The method of claim 1 , wherein the ALK7 polypeptide and/or ActRIIB polypeptide is a fusion protein that further comprises a heterologous domain.

3. The method of claim 2 , wherein the heterologous domain comprises an Fc immunoglobulin domain.

4. The method of claim 3 , wherein the Fc immunoglobulin domain comprises one or more amino acid modifications that promotes heterodimer formation.

5. The method of claim 3 , wherein the immunoglobulin Fc domain comprises one or more amino acid modifications that inhibit homodimer formation.

6. The method of claim 3 , wherein the heterologous domain comprises an Fc immunoglobulin domain from an IgG immunoglobulin.

7. The method of claim 2 , wherein the fusion protein further comprises a linker domain positioned between the ALK7 domain and the heterologous domain and/or a linker domain positioned between the ActRIIB domain and the heterologous domain.

8. The method of claim 1 , wherein the ALK7 polypeptide and/or ActRIIB polypeptide comprises one or more modified amino acid residues selected from the group consisting of: a glycosylated amino acid, a PEGylated amino acid, a farnesylated amino acid, an acetylated amino acid, a biotinylated amino acid, and an amino acid conjugated to a lipid moiety.

9. The method of claim 1 , wherein the ALK7 polypeptide and/or ActRIIB polypeptide is glycosylated.

10. The method of claim 1 , wherein the heteromultimer is an ALK7:ActRIIB heterodimer.

11. The method of claim 2 , wherein the ALK7 polypeptide comprises an amino acid sequence that is at least 95% identical to amino acids 28-92 of SEQ ID NO: 9, and wherein the ActRIIB polypeptide comprises an amino acid sequence that is at least 95% identical to amino acids 29-109 of SEQ ID NO: 1.

12. The method of claim 11 , wherein the ALK7 polypeptide comprises the amino acid sequence corresponding to amino acids 28-92 of SEQ ID NO: 9, and wherein the ActRIIB polypeptide comprises the amino acid sequence corresponding to amino acids 29-109 of SEQ ID NO: 1.

13. The method of claim 2 , wherein the ALK7 polypeptide comprises an amino acid sequence that is at least 90% identical to the amino acid sequence of SEQ ID NO: 46, and wherein the ActRIIB polypeptide comprises an amino acid sequence that is at least 90% identical to the amino acid sequence of SEQ ID NO: 2.

14. The method of claim 13 , wherein the ALK7 polypeptide comprises an amino acid sequence that is at least 95% identical to the amino acid sequence of SEQ ID NO: 46, and wherein the ActRIIB polypeptide comprises an amino acid sequence that is at least 95% identical to the amino acid sequence of SEQ ID NO: 2.

15. The method of claim 14 , wherein the ALK7 polypeptide comprises the amino acid sequence of SEQ ID NO: 46, and wherein the ActRIIB polypeptide comprises the amino acid sequence of SEQ ID NO: 2.

16. The method of claim 2 , wherein the heterologous domain comprises an Fc immunoglobulin domain, wherein the Fc immunoglobulin domain is an IgG1 immunoglobulin domain.

17. The method of claim 12 , wherein the heterologous domain comprises an Fc immunoglobulin domain, wherein the Fc immunoglobulin domain is an IgG1 immunoglobulin domain.

18. The method of claim 14 , wherein the heterologous domain comprises an Fc immunoglobulin domain, wherein the Fc immunoglobulin domain is an IgG1 immunoglobulin domain.

19. The method of claim 15 , wherein the heterologous domain comprises an Fc immunoglobulin domain, wherein the Fc immunoglobulin domain is an IgG1 immunoglobulin domain.

20. The method of claim 11 , wherein the fusion protein further comprises a linker domain positioned between the ALK7 domain and the heterologous domain and/or a linker domain positioned between the ActRIIB domain and the heterologous domain.

21. The method of claim 12 , wherein the fusion protein further comprises a linker domain positioned between the ALK7 domain and the heterologous domain and/or a linker domain positioned between the ActRIIB domain and the heterologous domain.

22. The method of claim 15 , wherein the fusion protein further comprises a linker domain positioned between the ALK7 domain and the heterologous domain and/or a linker domain positioned between the ActRIIB domain and the heterologous domain.

23. The method of claim 14 , wherein the fusion protein further comprises a linker domain positioned between the ALK7 domain and the heterologous domain and/or a linker domain positioned between the ActRIIB domain and the heterologous domain.

Assignees

• Acceleron Pharma Inc

Inventors

• Kumar Ravindra
• Grinberg Asya
• Sako Dianne
• Pearsall Robert Scott
• Castonguay Roselyne
• Li Gang
• Dagon Yossi
• Knopf John

Classifications

• C07K2319/30

  Non-immunoglobulin-derived peptide or protein having an immunoglobulin constant or Fc region, or a fragment thereof, attached thereto · CPC title

• C07K14/71 Primary

  for growth factors; for growth regulators · CPC title

• A61P43/00

  Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00 · CPC title

• A61P7/06

  Antianaemics · CPC title

• A61P7/00

  Drugs for disorders of the blood or the extracellular fluid · CPC title