Reagent nozzle sipper mixing system and method

Patent metadata

Field	Value
Publication number	US-11016008-B2
Application number	US-201715841098-A
Country	US
Kind code	B2
Filing date	Dec 13, 2017
Priority date	Jan 5, 2017
Publication date	May 25, 2021
Grant date	May 25, 2021

Abstract

An analysis instrument may perform analytical operations on an analyte that is combined with multiple reagents prior to being introduced into a flow cell. The instrument may include a nozzle sipper that aspirates reagents from a recipient, along with an analyte. The reagents may be directed to a volume and may be repeatedly moved into and out of the volume by cycling of a pump. The reagents may be ejected into a destination recipient with the nozzle sipper promoting vorticity in the recipient to enhance mixing. The repeated aspiration and ejection through the nozzle sipper effectively mixes the reagents and the template in an automated or semi-automated fashion.

First claim

What is claimed is:

1. A system comprising:
a flow cell flow path configured to be fluidically connected with a flow cell configured to support analytes of interest in an analysis system;
a fluidic system comprising a plurality of reagent flow paths, a further flow path, a mixing channel, and a selector valve, wherein:
each of the plurality of reagent flow paths has a first end configured to be fluidically connected with a different reagent recipient of a plurality of reagent recipients and a second end fluidically connected with the selector valve,
the further flow path has a first end configured to be fluidically connected with a destination recipient and a second end fluidically connected with the selector valve,
the mixing channel has a first end fluidically connected to the selector valve, and
the fluidic system is configured to:
aspirate reagents from the plurality of reagent recipients into the mixing channel via the selector valve,
eject the aspirated reagents from the mixing channel into the destination recipient via the selector valve and the further flow path, and
deliver the reagents from the destination recipient to the flow cell flow path; and

a nozzle sipper fluidically connected with the further flow path, the nozzle sipper comprising an elongated body having a central lumen extending between a proximal end of the elongated body and a distal end of the elongated body and a nozzle insert disposed in the distal end of the elongated body, wherein the fluidic system is configured to both aspirate the mixed reagents from the destination recipient and eject mixed reagents back into the destination recipient via the nozzle insert.

2. The system of claim 1 , wherein the nozzle insert and elongated body are dimensioned to promote vorticity mixing in the destination recipient when the reagents are expelled from the nozzle sipper through the nozzle insert and into the destination recipient.

3. The system of claim 1 , wherein the central lumen has a nominal inner diameter of about 0.5 mm and narrows to about 0.25 mm at the nozzle insert.

4. The system of claim 1 , wherein the distal end of the nozzle sipper has a wedged shape with facets meeting at an apex that is offset with respect to a central axis of the nozzle sipper.

5. The system of claim 4 , wherein the nozzle insert has a distal end that is shape-compliant with the wedged shape of the distal end of the nozzle sipper.

6. The system of claim 4 , wherein the wedged shape comprises four facets meeting at the apex.

7. The system of claim 1 , wherein the nozzle sipper is configured to extend to a nominal distance of 2 mm from a bottom surface of the destination recipient when the nozzle sipper is fluidically connected with the destination recipient.

8. The system of claim 1 , comprising a plurality of other sippers configured for aspirating respective reagents from the plurality of reagent recipients, wherein the other sippers do not have nozzle inserts.

9. The system of claim 1 , wherein the nozzle sipper is sized so as to accelerate fluid that is flowed through the nozzle sipper at a flow rate of at least about 5,000 μL/min to a flow velocity of at least about 1600 mm/s.

10. A system comprising:
a flow cell configured to support analytes of interest in an analysis system;
a fluidic system comprising a plurality of reagent flow paths, a further flow path, a mixing channel, and a selector valve, wherein:
each of the plurality of reagent flow paths has a first end configured to be fluidically connected with a different reagent recipient of a plurality of reagent recipients and a second end fluidically connected with the selector valve,
the further flow path has a first end configured to be fluidically connected with a destination recipient and a second end fluidically connected with the selector valve,
the mixing channel has a first end fluidically connected to the selector valve;

a nozzle sipper fluidically connected with the further flow path, the nozzle sipper comprising an elongated body having a proximal end and a distal end and a nozzle located at the distal end of the elongated body, wherein the nozzle sipper has a central lumen extending from the proximal end of the elongated body to the nozzle, wherein the nozzle reduces a nominal interior diameter of the central lumen; and
control circuitry operatively coupled to the fluidic system, the control circuity comprising one or more processors and one or more memory devices storing computer-executable instructions that, when executed by the one or more processors, cause the fluidic system to:
aspirate a set of the reagents one-by-one from the plurality of reagent recipients into the mixing channel via the selector valve,
eject the reagents in the set of reagents from the mixing channel into the destination recipient via the selector valve and the further flow path through the nozzle,
aspirate the set of reagents from the destination recipient through the nozzle for mixing, and
eject the set of mixed reagents back into the destination recipient through the nozzle.

11. The system of claim 10 , wherein the nozzle comprises an insert inserted into the distal end of the elongated body.

12. The system of claim 10 , wherein the system further comprises the destination recipient, and wherein the destination recipient contains an analyte to be sequenced.

13. The system of claim 10 , wherein the central lumen has a nominal inner diameter of 0.5 mm and narrows to about 0.25 mm at the nozzle.

14. The system of claim 10 , wherein the distal end of the nozzle sipper has a wedged shape with facets meeting at an apex that is offset with respect to a central axis of the nozzle sipper.

15. The system of claim 14 , wherein the nozzle has a distal end that is shape-compliant with the wedged shape of the distal end of the nozzle sipper.

Assignees

• Illumina Inc

Inventors

• Drews Bradley Kent
• Wang Michael Dai
• Ulmanella Umberto
• Osmus James Michael
• Clark Stephen Wayne
• Whitacre Johanna Lynn
• Phelps Steven Scott
• Alvarez Michelle L
• Niziolek Michael Adalbert
• Bryan Debra Sue
• Darland Joshua Augustin

Classifications

• G01N2035/1058

  for mixing · CPC title

• G01N2001/386

  Other diluting or mixing processes · CPC title

• G01N2001/1436

  Ejector · CPC title

• G01N2001/1418

  Depression, aspiration · CPC title

• G01N35/1097 Primary

  characterised by the valves (valves in general F16K) · CPC title