Method for observing a sample
US-2020124586-A1 · Apr 23, 2020 · US
US10908060B2 · US · B2
| Field | Value |
|---|---|
| Publication number | US-10908060-B2 |
| Application number | US-201916595661-A |
| Country | US |
| Kind code | B2 |
| Filing date | Oct 8, 2019 |
| Priority date | Oct 9, 2018 |
| Publication date | Feb 2, 2021 |
| Grant date | Feb 2, 2021 |
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The particle may associated with a set of parameters, comprising at least a size of the particle and a refractive index of the particle.
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The invention claimed is: 1. A method for determining parameters of a particle present in a sample, the sample lying between an image sensor and a light source, the image sensor lying in a detection plane, the method comprising: a) illuminating the sample with the light source, the light source emitting an incident light wave that propagates along a propagation axis; b) acquiring an image of the sample with the image sensor, the image sensor being exposed to an exposure light wave; c) determining a position of the particle in the detection plane or in a plane parallel to the detection plane; d) on the basis of the acquired image, applying a propagation operator, for a plurality of distances from the detection plane, so as to estimate, at each distance, a complex amplitude of the exposure light wave; e) on the basis of the complex amplitude estimated, at various distances, obtaining a profile representing a variation of the complex amplitude of the exposure light wave along an axis parallel to the propagation axis and passing through the position of the particle; wherein the particle is associated with a set of parameters, comprising at least a size of the particle and a refractive index of the particle, the method also comprising: f) modelling a particle, taking into account a value of each parameter of the set of parameters, and modelling an exposure light wave, propagating toward the image sensor, under the effect of an illumination, with the light source, of the modelled particle; g) on the basis of the modelled exposure light wave, forming a profile representing a variation in the complex amplitude of the modelled exposure light wave, along an axis parallel to the propagation axis; h) comparing the profile obtained in e) with the modelled profile resulting from g), so as to determine the value of at least one parameter of the particle. 2. The method as claimed in claim 1 , wherein the refractive index comprises a real part and an imaginary part. 3. The method as claimed in claim 1 , wherein the set of parameters also comprises a distance of the particle with respect to the detection plane. 4. The method as claimed in claim 1 , wherein: f) comprises modelling particles respectively having various values of at least one parameter, so as to obtain, following g), a database of modelled profiles, each modelled profile being associated with one set of parameters; h) comprises minimizing a deviation between the profile resulting from e) and the modelled profiles of the database, the respective values of the parameters of the particle being those minimizing the deviation. 5. The method as claimed in claim 1 , wherein f), g) and h) are carried out iteratively, the value of a parameter of the particle resulting from one iteration being used to initialize a following iteration. 6. The method as claimed in claim 1 , wherein: f) comprises modelling particles of various sizes and/or of various refractive indices, so as to obtain, following g), a database of modelled profiles, each modelled profile being associated with a size and/or a refractive index; h) comprises determining the size of the particle and/or the refractive index of the particle. 7. The method as claimed in claim 1 , wherein: f) comprises modelling particles located at various distances from the detection plane, so as to obtain, following g) a database of modelled profiles, each modelled profile being associated with a distance with respect to the detection plane; h) comprises determining the distance between the particle and the detection plane. 8. The method as claimed in claim 1 , wherein steps f) to h) are implemented iteratively, such that, in each iteration, the profile modelled in g) gets gradually closer to the profile determined in e). 9. The method as claimed in claim 8 , wherein step h) of an iteration comprises: determining a deviation between the profile modelled in g) of the same iteration, and the profile resulting from e); determining a gradient of the deviation as a function of at least one parameter of the set of parameters, so as to determine the values of the parameters of the particle modelled in f) of the following iteration. 10. The method as claimed in claim 1 , also comprising: applying a propagation operator to the acquired image, while considering a plurality of distances with respect to the detection plane, so as to obtain a stack of reconstructed images, each reconstructed image being associated with a distance with respect to the detection plane; on the basis of a reconstructed image, estimating a size of the particle; such that h) comprises taking into account the size of the particle estimated on the basis of the reconstructed image. 11. The method as claimed in claim 1 , wherein the particle is a cell, the method comprising determining an alive or dead state of the cell depending on the refractive index. 12. The method as claimed in claim 11 , wherein the refractive index comprises a real part and an imaginary part, the alive or dead state of the cell being defined depending on a comparison between the real part and the imaginary part. 13. The method as claimed in claim 1 , wherein there is no image-forming optic between the sample and the image sensor. 14. The method as claimed in claim 1 , wherein an optical system lies between the sample and the image sensor, the optical system defining an image plane and an object plane, and wherein, in b), the image is acquired in a defocused configuration, the detection plane being offset with respect to the image plane, and/or a plane of the sample, in which the sample lies, being offset with respect to the object plane. 15. A device for observing a sample, the sample comprising particles, the device comprising: a light source, configured to illuminate the sample; a sample holder, configured to receive the sample; an image sensor, placed such that when the sample is placed on the holder, it lies between the image sensor and the light source, the image sensor being configured to acquire an image of the sample; a processor, configured to implement steps d) to h) of a method as claimed in claim 1 , on the basis of an image acquired by the image sensor. 16. The device as claimed in claim 15 , wherein no image-forming optic is placed between the image sensor and the processor. 17. The device as claimed in claim 15 , comprising an optical system lying between the sample and the image sensor, the optical system defining an image plane and an object plane, the device comprising a means for adjusting the optical system, or the sample, or the image sensor, such that: the detection plane is offset from the image plane; and/or the object plane is offset from a plane of the sample, in which the sample lies.
Object light being transmitted through the object, e.g. illumination through living cells · CPC title
Digital holography, i.e. recording holograms with digital recording means (holobject computation G03H1/0866) · CPC title
Reconstruction aspect, e.g. numerical focusing · CPC title
Optical arrangements · CPC title
Single particle scatter · CPC title
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