Microorganisms and methods for the production of fatty acids and fatty acid derived products

Patent metadata

Field	Value
Publication number	US-10465213-B2
Application number	US-201615083924-A
Country	US
Kind code	B2
Filing date	Mar 29, 2016
Priority date	Aug 10, 2012
Publication date	Nov 5, 2019
Grant date	Nov 5, 2019

Abstract

This invention relates to metabolically engineered microorganism strains, such as bacterial strains, in which there is an increased utilization of malonyl-CoA for production of a fatty acid or fatty acid derived product, wherein the modified microorganism produces fatty acyl-CoA intermediates via a malonyl-CoA dependent but malonyl-ACP independent mechanism.

First claim

What is claimed is:

1. A genetically modified microorganism that produces a fatty acid or fatty acid derived product comprising (i) a genetic modification to overexpress a gene encoding an acetoacetyl-CoA synthase enzyme comprising Npht7, (ii) a deletion of a tesB gene and (iii) a genetic modification to overexpress a gene encoding AtTE thioesterase enzyme,
wherein:
the fatty acid or fatty acid derived product is produced via a growing acetyl-CoA or fatty acyl-CoA chain;
the acetyl-CoA or fatty acyl-CoA chain is extended with at least one malonyl-CoA molecule;
and
the fatty acid or fatty acid derived product is a mixture enriched for chain length C8 wherein the C8 chain comprises >10% of the total fatty acid product on mass (g) basis.

2. The genetically modified microorganism of claim 1 , wherein a butyryl-CoA intermediate is made from acetyl-CoA and malonyl-CoA.

3. The genetically modified microorganism of claim 1 , wherein the microorganism comprises a genetic modification to convert an acyl-CoA into a fatty acid derived product, including an alcohol, aldehyde, alkene, alkane or diacid.

4. The genetically modified microorganism of claim 1 , wherein the microorganism comprises a genetic modification to overexpress an enzyme selected from the group consisting of an enoyl-CoA reductase, a ketoacyl-CoA reductase and a 3-hydroxyacyl-CoA dehydratase.

5. The genetically modified microorganism of claim 4 , wherein the microorganism comprises a genetic modification to overexpress an enoyl-CoA reductase that can utilize the cofactor NADH, NADPH or both NADH and NADPH, or a ketoacyl-CoA reductase that can utilize the cofactor NADH, NADPH or both NADH and NADPH.

6. The genetically modified microorganism of claim 4 , wherein the enoyl-CoA reductase is E.C. No. 1.3.1.9, the ketoacyl-CoA reductase is E.C. No. 1.1.1.157, and the 3-hydroxyacyl-CoA dehydratase is E.C. No. 4.2.1.17.

7. The genetically modified microorganism of claim 4 , wherein the enoyl-CoA reductase comprises a trans-2-enoyl-CoA reductase, the ketoacyl-CoA reductase comprises a 3-hydroxybutyryl-CoA dehydrogenase, and the 3-hydroxyacyl-CoA dehydratase comprises an enoyl-CoA hydratase.

8. The genetically modified microorganism of claim 1 , wherein:
the microorganism produces a fatty acid and the microorganism comprises a genetic modification to overexpress a fatty acyl-CoA thioesterase, or a fatty acyl-CoA phosphotransferase and a fatty acid kinase;
the microorganism produces a fatty aldehyde and the microorganism comprises a genetic modification to overexpress a fatty acyl-CoA reductase;
the microorganism produces a fatty alcohol and the microorganism comprises a genetic modification to overexpress an alcohol-forming acyl-CoA reductase, a long-chain-fatty-acyl-CoA reductase and an alcohol dehydrogenase, or an aldehyde dehydrogenase and an alcohol dehydrogenase; or
the microorganism produces a diacid and the microorganism comprises a genetic modification to overexpress one or more enzymes capable of catalyzing the conversion of a fatty acid to a diacid via omega or terminal oxidation.

9. The genetically modified microorganism of claim 1 , wherein the microorganism is selected from bacteria, cyanobacteria, filamentous fungi and yeasts.

Assignees

• Cargill Inc

Inventors

• Liao Hans
• Spindler Eileen
• Warner Joseph R
• Louie Michael
• Ribble Wendy
• Prather Brittany
• Evans Ron
• Lipscomb Tanya E W
• Lynch Michael D

Classifications

• C12N15/70 Primary

  Vectors or expression systems specially adapted for E. coli · CPC title

• C12P7/40

  containing a carboxyl group {including Peroxycarboxylic acids} · CPC title

• C12P7/6409 Primary

  Fatty acids · CPC title

• C12Y101/01157

  3-Hydroxybutyryl-CoA dehydrogenase (1.1.1.157) · CPC title

• C12Y103/01009

  Enoyl-[acyl-carrier-protein] reductase (NADH) (1.3.1.9) · CPC title