Genetically engineered bacterium for the production of isobutylene

Patent metadata

Field	Value
Publication number	US-10316337-B2
Application number	US-201815922451-A
Country	US
Kind code	B2
Filing date	Mar 15, 2018
Priority date	Oct 13, 2015
Publication date	Jun 11, 2019
Grant date	Jun 11, 2019

Abstract

The invention relates to a genetically engineered bacterium having an enzyme that converts 3-hydroxyisovaleryl-CoA to 3-hydroxyisovalerate and an enzyme that converts 3-hydroxyisovalerate to isobutylene. Typically, the bacterium is capable of producing isobutylene from a gaseous substrate containing CO, CO2, and/or H2, such as syngas or an industrial waste gas.

First claim

The invention claimed is:

1. A genetically engineered C1-fixing bacterium comprising:
(a) an enzyme that converts 3-hydroxyisovaleryl-CoA to 3-hydroxyisovalerate and
(b) an enzyme that converts 3-hydroxyisovalerate to isobutylene,

wherein at least one of the enzymes is exogenous to the bacterium.

2. The bacterium of claim 1 , wherein the enzyme that converts 3-hydroxyisovaleryl-CoA to 3-hydroxyisovalerate is thioesterase (EC 3.1.2.20), phosphate butyryltransferase (EC 2.3.1.19) and butyrate kinase (EC 2.7.2.7), or CoA-transferase (EC 2.8.3.9).

3. The bacterium of claim 1 , wherein the enzyme that converts 3-hydroxyisovalerate to isobutylene is hydroxyisovalerate phosphorylase/decarboxylase or mevalonate diphosphate decarboxylase (EC 4.1.1.33).

4. The bacterium of claim 1 , wherein the bacterium further comprises one or more enzymes selected from the group consisting of citramalate synthase (EC 2.3.1.182), 3-isopropylmalate dehydratase (EC 4.2.1.35), 3-isopropylmalate dehydrogenase (EC 1.1.1.85), acetolactate synthase (EC 2.2.1.6), ketol-acid reductoisomerase (EC 1.1.1.86), dihydroxyacid dehydratase (EC 4.2.1.9), ketoisovalerate oxidoreductase (EC 1.2.7.7), 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.99.12), crotonase/3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55), crotonyl-CoA carboxylase-reductase (EC 1.3.1.86), crotonyl-CoA reductase (EC 1.3.1.44), 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116), enoyl-CoA hydratase (4.2.1.17), thiolase (EC 2.3.1.9), thioesterase (EC 3.1.2.20), phosphate butyryltransferase (EC 2.3.1.19), butyrate kinase (EC 2.7.2.7), or CoA-transferase (EC 2.8.3.9), acetoacetate decarboxylase (EC 4.1.1.4), alpha-ketoisovalerate decarboxylase (EC 4.1.1.74), 3-hydroxyisovaleryl-CoA synthase, hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10), 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55), enoyl-CoA hydratase (EC 4.2.1.17), methylcrotonyl-CoA decarboxylase, and methylcrotonoyl-CoA carboxylase (EC 6.4.1.4).

5. The bacterium of claim 1 , wherein the bacterium is an anaerobe, an acetogen, an ethanologen, a carboxydotroph, or a methanotroph.

6. The bacterium of claim 1 , wherein the bacterium is derived from a parental bacterium selected from the group consisting of Acetobacterium woodii, Alkalibaculum bacchii, Blautia product, Butyribacterium methylotrophicum, Clostridium aceticum, Clostridium autoethanogenum, Clostridium carboxidivorans, Clostridium coskatii, Clostridium drakei, Clostridium formicoaceticum, Clostridium ljungdahlii, Clostridium magnum, Clostridium ragsdalei, Clostridium scatologenes, Eubacterium limosum, Moorella thermautotrophica, Moorella thermoacetica, Oxobacter pfennigii, Sporomusa ovata, Sporomusa silvacetica, Sporomusa sphaeroides , and Thermoanaerobacter kiuvi.

7. A method of producing isobutylene comprising culturing the bacterium of claim 1 in the presence of a substrate, whereby the bacterium produces isobutylene.

8. The method of claim 7 , wherein the substrate is a gaseous substrate comprising one or more of CO, CO 2 , CH 4 , and H 2 .

9. The method of claim 7 , wherein the substrate comprises syngas or industrial waste gas.

10. The method of claim 7 , wherein the bacterium is an anaerobe, an acetogen, an ethanologen, a carboxydotroph, or a methanotroph.

11. The method of claim 7 , wherein the bacterium is derived from a parental bacterium selected from the group consisting of Acetobacterium woodii, Alkalibaculum bacchii, Blautia product, Butyribacterium methylotrophicum, Clostridium aceticum, Clostridium autoethanogenum, Clostridium carboxidivorans, Clostridium coskatii, Clostridium drakei, Clostridium formicoaceticum, Clostridium ljungdahlii, Clostridium magnum, Clostridium ragsdalei, Clostridium scatologenes, Eubacterium limosum, Moorella thermautotrophica, Moorella thermoacetica, Oxobacter pfennigii, Sporomusa ovata, Sporomusa silvacetica, Sporomusa sphaeroides , and Thermoanaerobacter kiuvi.

Assignees

• Lanzatech New Zealand Ltd

Inventors

• Koepke Michael
• Jensen Rasmus Overgaard

Classifications

• C12Y101/01002

  Alcohol dehydrogenase (NADP+) (1.1.1.2), i.e. aldehyde reductase · CPC title

• C12P7/18

  polyhydric · CPC title

• C12Y207/02007

  Butyrate kinase (2.7.2.7) · CPC title

• C12P5/026

  Unsaturated compounds, i.e. alkenes, alkynes or allenes · CPC title

• C12P7/04

  acyclic · CPC title