Gradient elution moving boundary electrophoresis for use with complex samples and detection of toxins

Patent metadata

Field	Value
Publication number	US-10167498-B1
Application number	US-201614988373-A
Country	US
Kind code	B1
Filing date	Jan 5, 2016
Priority date	Apr 16, 2010
Publication date	Jan 1, 2019
Grant date	Jan 1, 2019

Abstract

Methods of detecting the presence of toxins in a sample using electrophoretic separations and of performing electrophoretic separation of complex samples are provided. The method of detecting the presence of toxins includes reacting a sample and a substrate with a signaling enzyme which converts the substrate to the product in a reaction medium, introducing a run buffer into a separation channel having an inlet end, selectively introducing at least one of the substrate and the product of the reaction medium into the inlet end of the separation channel, electrophoretically separating the substrate and the product, and determining the rate of conversion of the substrate to the product, wherein a change in the rate of conversion is indicative of the presence of toxins. The method of performing electrophoretic separations of complex samples having charged particulates and oppositely charged analytes comprising introducing a run buffer into a separation channel having an inlet end, selectively introducing the oppositely charged analytes in the complex sample into the separation channel, and electrophoretically separating the charged particulates and the oppositely charged analytes. Additionally, a device for varying with respect to time the bulk flow of a fluid in a separation channel of an electrophoretic device having a buffer reservoir in fluid contact with the separation channel is provided. The device includes a pressure sensor in fluid contact with a buffer reservoir, a high pressure reservoir in selective fluidic communication with the buffer reservoir, a low pressure reservoir in selective fluidic communication with the buffer reservoir and in fluidic communication with the high pressure reservoir, and a pumping device for pumping a gas from the low pressure reservoir to the high pressure reservoir.

First claim

What is claimed is:

1. A method of indirectly detecting the presence of toxins in a complex sample using electrophoretic separations, the method comprising:
introducing a run buffer into a separation channel having an inlet end;
introducing the complex sample into a sample reservoir in fluid contact with the separation channel, wherein the complex sample was subject to no sample preparation or was subject to sample preparation selected from the group consisting of dilution, suspension, filtration, and combinations thereof;
reacting the complex sample with a signaling enzyme in a reaction medium containing a substrate for the signaling enzyme, wherein the signaling enzyme converts the substrate to a product;
separating the substrate and the product by:
applying an electric potential across the separation channel to achieve electrophoretic migration of the substrate and the product, and
varying with respect to time the bulk flow of the run buffer through the separation channel to achieve selective introduction of the substrate and the product into the inlet end of the separation channel and differential migration of the substrate and the product therethrough such that the substrate and the product are sequentially detected and quantified; and

determining a rate of conversion of the substrate to the product, wherein a change in the rate of conversion is indicative of the presence of toxins.

2. The method of claim 1 , wherein the rate of conversion is determined by comparing the rate of conversion of the substrate to the product with a control rate of conversion of a control sample assay.

3. The method of claim 1 , wherein the substrate and the product are sequentially detected and quantified at a single time point.

4. The method of claim 1 , wherein the signaling enzyme is chosen from oxidoreductases, transferases, hydrolases, lyases, isomerases, and ligases.

5. The method of claim 4 , wherein the signaling enzyme is chosen from acetylcholinesterase and adenylate cyclase.

6. The method of claim 5 , wherein the substrate is chosen from acetylcholine and adenosine triphosphate.

7. The method of claim 5 , wherein the product is chosen from choline and cyclic adenosine monophosphate.

8. The method of claim 1 , wherein the complex sample comprises at least one toxin chosen from nerve agents, pesticides, and endotoxins.

9. The method of claim 1 , wherein the complex sample comprises at least one toxin chosen from tabun, sarin, soman, cyclosarin, tacrine, VE, VG, VM, VR, VX, Novichok agents, dichlorvos, malathion, parathion, and malaoxon.

10. The method of claim 1 , wherein the complex sample is chosen from soil, mud, dirt, milk, apple juice, estuarine sediment, coal fly ash, blood serum, tomato leaves, peach leaves, citrus leaves, and calf serum.

11. The method of claim 1 , wherein the substrate and the product are separated via gradient elution moving boundary electrophoresis (GEMBE).

12. A method of indirectly detecting the presence of toxins in a complex sample using electrophoretic separations, the method comprising:
introducing a run buffer into a separation channel having an inlet end;
preparing the complex sample for the electrophoretic separation, wherein the preparing is selected from the group consisting of diluting the complex sample in sample buffer, suspending the complex sample in sample buffer, and combinations thereof;
introducing the complex sample into a sample reservoir in fluid contact with the separation channel;
reacting the complex sample with a signaling enzyme in a reaction medium containing a substrate for the signaling enzyme, wherein the signaling enzyme converts the substrate to a product;
separating the substrate and the product by:
applying an electric potential across the separation channel to achieve electrophoretic migration of the substrate and the product, and
varying with respect to time the bulk flow of the run buffer through the separation channel to achieve selective introduction of the substrate and the product into the inlet end of the separation channel and differential migration of the substrate and the product therethrough such that the substrate and the product are sequentially detected and quantified; and

determining a rate of conversion of the substrate to the product, wherein a change in the rate of conversion is indicative of the presence of toxins.

Assignees

• Applied Res Associates Inc

Inventors

• Henry Alyssa Catharyn
• Ross David Judson

Classifications

• G01N27/44791

  Microapparatus (sample containers with integrated microfluidic structures B01L3/5027) · CPC title

• B01L3/502738

  characterised by integrated valves (throttle valves in microfluidic sample containers B01L3/502746) · CPC title

• B01L3/502715

  characterised by interfacing components, e.g. fluidic, electrical, optical or mechanical interfaces · CPC title

• C12Q1/527

  involving lyase · CPC title

• G01N2550/00

  Electrophoretic profiling, e.g. for proteome analysis · CPC title